Gene : AT1G06050 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12136//PTHR12136:SF61 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // SUBFAMILY NOT NAMED Genomic Order:  536
Name:  ? AT1G06050 Secondary Identifier:  ? PAC:19655224
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06050 0.5kb upstream 0.5kb upstream 2451 true Chr1: 1830605-1833055 Arabidopsis thaliana
AT1G06050 0.5kb upstream 0.5kb upstream 500 false Chr1: 1832556-1833055 Arabidopsis thaliana
AT1G06050 0.5kb downstream 0.5kb downstream 2451 true Chr1: 1830105-1832555 Arabidopsis thaliana
AT1G06050 0.5kb downstream 0.5kb downstream 500 false Chr1: 1830105-1830604 Arabidopsis thaliana
AT1G06050 1.0kb upstream 1.0kb upstream 2951 true Chr1: 1830605-1833555 Arabidopsis thaliana
AT1G06050 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1832556-1833555 Arabidopsis thaliana
AT1G06050 1.0kb downstream 1.0kb downstream 2951 true Chr1: 1829605-1832555 Arabidopsis thaliana
AT1G06050 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1829605-1830604 Arabidopsis thaliana
AT1G06050 2.0kb upstream 2.0kb upstream 3951 true Chr1: 1830605-1834555 Arabidopsis thaliana
AT1G06050 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1832556-1834555 Arabidopsis thaliana
AT1G06050 2.0kb downstream 2.0kb downstream 3951 true Chr1: 1828605-1832555 Arabidopsis thaliana
AT1G06050 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1828605-1830604 Arabidopsis thaliana
AT1G06050 5.0kb upstream 5.0kb upstream 6951 true Chr1: 1830605-1837555 Arabidopsis thaliana
AT1G06050 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1832556-1837555 Arabidopsis thaliana
AT1G06050 5.0kb downstream 5.0kb downstream 6951 true Chr1: 1825605-1832555 Arabidopsis thaliana
AT1G06050 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1825605-1830604 Arabidopsis thaliana
AT1G06050 10.0kb upstream 10.0kb upstream 11951 true Chr1: 1830605-1842555 Arabidopsis thaliana
AT1G06050 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1832556-1842555 Arabidopsis thaliana
AT1G06050 10.0kb downstream 10.0kb downstream 11951 true Chr1: 1820605-1832555 Arabidopsis thaliana
AT1G06050 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1820605-1830604 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360221 5261 Brassicaceae View MSA
123828136 5264 Brassicales-Malvales View MSA
124337888 5266 SBM View MSA
124240683 5268 Malvidae View MSA
124065354 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.937        
cufflinks 2.82       Low
cufflinks 5.4        
cufflinks 3.47        
cufflinks 6.217       High
cufflinks 2.791       Low

0 Strain