Gene : HEXO2 A. thaliana TAIR10
Primary Identifier:  ? AT1G05590 Defline:  (1 of 1) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED
Genomic Order:  484 Name:  ? AT1G05590
Secondary Identifier:  ? PAC:19652830
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6902 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05590 0.5kb upstream 0.5kb upstream 3027 true Chr1: 1668850-1671876 Arabidopsis thaliana
AT1G05590 0.5kb upstream 0.5kb upstream 500 false Chr1: 1668850-1669349 Arabidopsis thaliana
AT1G05590 0.5kb downstream 0.5kb downstream 3027 true Chr1: 1669350-1672376 Arabidopsis thaliana
AT1G05590 0.5kb downstream 0.5kb downstream 500 false Chr1: 1671877-1672376 Arabidopsis thaliana
AT1G05590 1.0kb upstream 1.0kb upstream 3527 true Chr1: 1668350-1671876 Arabidopsis thaliana
AT1G05590 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1668350-1669349 Arabidopsis thaliana
AT1G05590 1.0kb downstream 1.0kb downstream 3527 true Chr1: 1669350-1672876 Arabidopsis thaliana
AT1G05590 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1671877-1672876 Arabidopsis thaliana
AT1G05590 2.0kb upstream 2.0kb upstream 4527 true Chr1: 1667350-1671876 Arabidopsis thaliana
AT1G05590 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1667350-1669349 Arabidopsis thaliana
AT1G05590 2.0kb downstream 2.0kb downstream 4527 true Chr1: 1669350-1673876 Arabidopsis thaliana
AT1G05590 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1671877-1673876 Arabidopsis thaliana
AT1G05590 5.0kb upstream 5.0kb upstream 7527 true Chr1: 1664350-1671876 Arabidopsis thaliana
AT1G05590 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1664350-1669349 Arabidopsis thaliana
AT1G05590 5.0kb downstream 5.0kb downstream 7527 true Chr1: 1669350-1676876 Arabidopsis thaliana
AT1G05590 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1671877-1676876 Arabidopsis thaliana
AT1G05590 10.0kb upstream 10.0kb upstream 12527 true Chr1: 1659350-1671876 Arabidopsis thaliana
AT1G05590 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1659350-1669349 Arabidopsis thaliana
AT1G05590 10.0kb downstream 10.0kb downstream 12527 true Chr1: 1669350-1681876 Arabidopsis thaliana
AT1G05590 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1671877-1681876 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361529 5261 Brassicaceae View MSA
123831341 5264 Brassicales-Malvales View MSA
124339325 5266 SBM View MSA
124240039 5268 Malvidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.707        
cufflinks 7.982        
cufflinks 5.059        
cufflinks 8.407        
cufflinks 4.483       Low
cufflinks 8.658       High

0 Strain