Gene : GLR3.4 A. thaliana TAIR10
Primary Identifier:  ? AT1G05200 Defline:  (1 of 2) PTHR18966//PTHR18966:SF190 - IONOTROPIC GLUTAMATE RECEPTOR // GLUTAMATE RECEPTOR 3.4-RELATED
Genomic Order:  442 Name:  ? AT1G05200
Secondary Identifier:  ? PAC:19655716
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05200 0.5kb upstream 0.5kb upstream 4693 true Chr1: 1504460-1509152 Arabidopsis thaliana
AT1G05200 0.5kb upstream 0.5kb upstream 500 false Chr1: 1504460-1504959 Arabidopsis thaliana
AT1G05200 0.5kb downstream 0.5kb downstream 4693 true Chr1: 1504960-1509652 Arabidopsis thaliana
AT1G05200 0.5kb downstream 0.5kb downstream 500 false Chr1: 1509153-1509652 Arabidopsis thaliana
AT1G05200 1.0kb upstream 1.0kb upstream 5193 true Chr1: 1503960-1509152 Arabidopsis thaliana
AT1G05200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1503960-1504959 Arabidopsis thaliana
AT1G05200 1.0kb downstream 1.0kb downstream 5193 true Chr1: 1504960-1510152 Arabidopsis thaliana
AT1G05200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1509153-1510152 Arabidopsis thaliana
AT1G05200 2.0kb upstream 2.0kb upstream 6193 true Chr1: 1502960-1509152 Arabidopsis thaliana
AT1G05200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1502960-1504959 Arabidopsis thaliana
AT1G05200 2.0kb downstream 2.0kb downstream 6193 true Chr1: 1504960-1511152 Arabidopsis thaliana
AT1G05200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1509153-1511152 Arabidopsis thaliana
AT1G05200 5.0kb upstream 5.0kb upstream 9193 true Chr1: 1499960-1509152 Arabidopsis thaliana
AT1G05200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1499960-1504959 Arabidopsis thaliana
AT1G05200 5.0kb downstream 5.0kb downstream 9193 true Chr1: 1504960-1514152 Arabidopsis thaliana
AT1G05200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1509153-1514152 Arabidopsis thaliana
AT1G05200 10.0kb upstream 10.0kb upstream 14193 true Chr1: 1494960-1509152 Arabidopsis thaliana
AT1G05200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1494960-1504959 Arabidopsis thaliana
AT1G05200 10.0kb downstream 10.0kb downstream 14193 true Chr1: 1504960-1519152 Arabidopsis thaliana
AT1G05200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1509153-1519152 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362126 5261 Brassicaceae View MSA
123828449 5264 Brassicales-Malvales View MSA
124343431 5266 SBM View MSA
124244155 5268 Malvidae View MSA
124064754 5270 Rosid View MSA
123739557 5271 Pentapetalae View MSA
122789775 5272 Eudicot View MSA
122045646 5273 Angiosperm View MSA
121348236 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.355        
cufflinks 4.718        
cufflinks 7.028        
cufflinks 4.579        
cufflinks 6.597        
cufflinks 2.397       Low

0 Strain