Gene : SPS3F A. thaliana TAIR10
Primary Identifier:  ? AT1G04920 Defline:  (1 of 1) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED
Genomic Order:  411 Name:  ? AT1G04920
Secondary Identifier:  ? PAC:19651826
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7238 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04920 0.5kb upstream 0.5kb upstream 4863 true Chr1: 1391502-1396364 Arabidopsis thaliana
AT1G04920 0.5kb upstream 0.5kb upstream 500 false Chr1: 1395865-1396364 Arabidopsis thaliana
AT1G04920 0.5kb downstream 0.5kb downstream 4863 true Chr1: 1391002-1395864 Arabidopsis thaliana
AT1G04920 0.5kb downstream 0.5kb downstream 500 false Chr1: 1391002-1391501 Arabidopsis thaliana
AT1G04920 1.0kb upstream 1.0kb upstream 5363 true Chr1: 1391502-1396864 Arabidopsis thaliana
AT1G04920 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1395865-1396864 Arabidopsis thaliana
AT1G04920 1.0kb downstream 1.0kb downstream 5363 true Chr1: 1390502-1395864 Arabidopsis thaliana
AT1G04920 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1390502-1391501 Arabidopsis thaliana
AT1G04920 2.0kb upstream 2.0kb upstream 6363 true Chr1: 1391502-1397864 Arabidopsis thaliana
AT1G04920 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1395865-1397864 Arabidopsis thaliana
AT1G04920 2.0kb downstream 2.0kb downstream 6363 true Chr1: 1389502-1395864 Arabidopsis thaliana
AT1G04920 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1389502-1391501 Arabidopsis thaliana
AT1G04920 5.0kb upstream 5.0kb upstream 9363 true Chr1: 1391502-1400864 Arabidopsis thaliana
AT1G04920 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1395865-1400864 Arabidopsis thaliana
AT1G04920 5.0kb downstream 5.0kb downstream 9363 true Chr1: 1386502-1395864 Arabidopsis thaliana
AT1G04920 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1386502-1391501 Arabidopsis thaliana
AT1G04920 10.0kb upstream 10.0kb upstream 14363 true Chr1: 1391502-1405864 Arabidopsis thaliana
AT1G04920 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1395865-1405864 Arabidopsis thaliana
AT1G04920 10.0kb downstream 10.0kb downstream 14363 true Chr1: 1381502-1395864 Arabidopsis thaliana
AT1G04920 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1381502-1391501 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366462 5261 Brassicaceae View MSA
123832824 5264 Brassicales-Malvales View MSA
124340203 5266 SBM View MSA
124237932 5268 Malvidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.706        
cufflinks 0.876        
cufflinks 0.654        
cufflinks 0.427        
cufflinks 0.517        
cufflinks 0.119     Low Low

0 Strain