Gene : AT1G33360 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11262//PTHR11262:SF4 - HSL AND CLP PROTEASE // ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL Genomic Order:  3297
Name:  ? AT1G33360 Secondary Identifier:  ? PAC:19657267
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33360 0.5kb upstream 0.5kb upstream 4649 true Chr1: 12091377-12096025 Arabidopsis thaliana
AT1G33360 0.5kb upstream 0.5kb upstream 500 false Chr1: 12091377-12091876 Arabidopsis thaliana
AT1G33360 0.5kb downstream 0.5kb downstream 4649 true Chr1: 12091877-12096525 Arabidopsis thaliana
AT1G33360 0.5kb downstream 0.5kb downstream 500 false Chr1: 12096026-12096525 Arabidopsis thaliana
AT1G33360 1.0kb upstream 1.0kb upstream 5149 true Chr1: 12090877-12096025 Arabidopsis thaliana
AT1G33360 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12090877-12091876 Arabidopsis thaliana
AT1G33360 1.0kb downstream 1.0kb downstream 5149 true Chr1: 12091877-12097025 Arabidopsis thaliana
AT1G33360 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12096026-12097025 Arabidopsis thaliana
AT1G33360 2.0kb upstream 2.0kb upstream 6149 true Chr1: 12089877-12096025 Arabidopsis thaliana
AT1G33360 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12089877-12091876 Arabidopsis thaliana
AT1G33360 2.0kb downstream 2.0kb downstream 6149 true Chr1: 12091877-12098025 Arabidopsis thaliana
AT1G33360 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12096026-12098025 Arabidopsis thaliana
AT1G33360 5.0kb upstream 5.0kb upstream 9149 true Chr1: 12086877-12096025 Arabidopsis thaliana
AT1G33360 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12086877-12091876 Arabidopsis thaliana
AT1G33360 5.0kb downstream 5.0kb downstream 9149 true Chr1: 12091877-12101025 Arabidopsis thaliana
AT1G33360 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12096026-12101025 Arabidopsis thaliana
AT1G33360 10.0kb upstream 10.0kb upstream 14149 true Chr1: 12081877-12096025 Arabidopsis thaliana
AT1G33360 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12081877-12091876 Arabidopsis thaliana
AT1G33360 10.0kb downstream 10.0kb downstream 14149 true Chr1: 12091877-12106025 Arabidopsis thaliana
AT1G33360 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12096026-12106025 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371904 5261 Brassicaceae View MSA
123832820 5264 Brassicales-Malvales View MSA
124344849 5266 SBM View MSA
124238610 5268 Malvidae View MSA
124069247 5270 Rosid View MSA
123739366 5271 Pentapetalae View MSA
122793797 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.741       Low
cufflinks 7.461        
cufflinks 5.702        
cufflinks 8.922       High
cufflinks 5.249        
cufflinks 7.546        

0 Strain