Gene : AT1G33330 A. thaliana TAIR10
Defline:  (1 of 7) PF00472 - RF-1 domain (RF-1) Genomic Order:  3294
Name:  ? AT1G33330 Secondary Identifier:  ? PAC:19649343
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33330 0.5kb upstream 0.5kb upstream 2078 true Chr1: 12084451-12086528 Arabidopsis thaliana
AT1G33330 0.5kb upstream 0.5kb upstream 500 false Chr1: 12084451-12084950 Arabidopsis thaliana
AT1G33330 0.5kb downstream 0.5kb downstream 2078 true Chr1: 12084951-12087028 Arabidopsis thaliana
AT1G33330 0.5kb downstream 0.5kb downstream 500 false Chr1: 12086529-12087028 Arabidopsis thaliana
AT1G33330 1.0kb upstream 1.0kb upstream 2578 true Chr1: 12083951-12086528 Arabidopsis thaliana
AT1G33330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12083951-12084950 Arabidopsis thaliana
AT1G33330 1.0kb downstream 1.0kb downstream 2578 true Chr1: 12084951-12087528 Arabidopsis thaliana
AT1G33330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12086529-12087528 Arabidopsis thaliana
AT1G33330 2.0kb upstream 2.0kb upstream 3578 true Chr1: 12082951-12086528 Arabidopsis thaliana
AT1G33330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12082951-12084950 Arabidopsis thaliana
AT1G33330 2.0kb downstream 2.0kb downstream 3578 true Chr1: 12084951-12088528 Arabidopsis thaliana
AT1G33330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12086529-12088528 Arabidopsis thaliana
AT1G33330 5.0kb upstream 5.0kb upstream 6578 true Chr1: 12079951-12086528 Arabidopsis thaliana
AT1G33330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12079951-12084950 Arabidopsis thaliana
AT1G33330 5.0kb downstream 5.0kb downstream 6578 true Chr1: 12084951-12091528 Arabidopsis thaliana
AT1G33330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12086529-12091528 Arabidopsis thaliana
AT1G33330 10.0kb upstream 10.0kb upstream 11578 true Chr1: 12074951-12086528 Arabidopsis thaliana
AT1G33330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12074951-12084950 Arabidopsis thaliana
AT1G33330 10.0kb downstream 10.0kb downstream 11578 true Chr1: 12084951-12096528 Arabidopsis thaliana
AT1G33330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12086529-12096528 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370419 5261 Brassicaceae View MSA
123828893 5264 Brassicales-Malvales View MSA
124321564 5266 SBM View MSA
124244254 5268 Malvidae View MSA
124071527 5270 Rosid View MSA
123737277 5271 Pentapetalae View MSA
122795361 5272 Eudicot View MSA
122041593 5273 Angiosperm View MSA
121346741 5274 Embryophyte View MSA
123380435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.763        
cufflinks 4.916        
cufflinks 11.271       High
cufflinks 4.96        
cufflinks 10.393        
cufflinks 4.176       Low

0 Strain