Gene : HAF01 A. thaliana TAIR10
Primary Identifier:  ? AT1G32750 Defline:  (1 of 2) K03125 - transcription initiation factor TFIID subunit 1 (TAF1)
Genomic Order:  3245 Name:  ? AT1G32750
Secondary Identifier:  ? PAC:19656601
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G32750 0.5kb upstream 0.5kb upstream 11019 true Chr1: 11846247-11857265 Arabidopsis thaliana
AT1G32750 0.5kb upstream 0.5kb upstream 500 false Chr1: 11856766-11857265 Arabidopsis thaliana
AT1G32750 0.5kb downstream 0.5kb downstream 11019 true Chr1: 11845747-11856765 Arabidopsis thaliana
AT1G32750 0.5kb downstream 0.5kb downstream 500 false Chr1: 11845747-11846246 Arabidopsis thaliana
AT1G32750 1.0kb upstream 1.0kb upstream 11519 true Chr1: 11846247-11857765 Arabidopsis thaliana
AT1G32750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11856766-11857765 Arabidopsis thaliana
AT1G32750 1.0kb downstream 1.0kb downstream 11519 true Chr1: 11845247-11856765 Arabidopsis thaliana
AT1G32750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11845247-11846246 Arabidopsis thaliana
AT1G32750 2.0kb upstream 2.0kb upstream 12519 true Chr1: 11846247-11858765 Arabidopsis thaliana
AT1G32750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11856766-11858765 Arabidopsis thaliana
AT1G32750 2.0kb downstream 2.0kb downstream 12519 true Chr1: 11844247-11856765 Arabidopsis thaliana
AT1G32750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11844247-11846246 Arabidopsis thaliana
AT1G32750 5.0kb upstream 5.0kb upstream 15519 true Chr1: 11846247-11861765 Arabidopsis thaliana
AT1G32750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11856766-11861765 Arabidopsis thaliana
AT1G32750 5.0kb downstream 5.0kb downstream 15519 true Chr1: 11841247-11856765 Arabidopsis thaliana
AT1G32750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11841247-11846246 Arabidopsis thaliana
AT1G32750 10.0kb upstream 10.0kb upstream 20519 true Chr1: 11846247-11866765 Arabidopsis thaliana
AT1G32750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11856766-11866765 Arabidopsis thaliana
AT1G32750 10.0kb downstream 10.0kb downstream 20519 true Chr1: 11836247-11856765 Arabidopsis thaliana
AT1G32750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11836247-11846246 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373235 5261 Brassicaceae View MSA
123831121 5264 Brassicales-Malvales View MSA
124337070 5266 SBM View MSA
124251437 5268 Malvidae View MSA
124067609 5270 Rosid View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.766        
cufflinks 8.567        
cufflinks 5.737       Low
cufflinks 9.793       High
cufflinks 6.605        
cufflinks 8.482        

0 Strain