Gene : AT1G31490 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31642//PTHR31642:SF24 - FAMILY NOT NAMED // HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  3120
Name:  ? AT1G31490 Secondary Identifier:  ? PAC:19652522
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4203 Arabidopsis thaliana pathologic  
Athaliana PWY-5835 Arabidopsis thaliana pathologic  
Athaliana PWY-6801 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31490 0.5kb upstream 0.5kb upstream 2567 true Chr1: 11271228-11273794 Arabidopsis thaliana
AT1G31490 0.5kb upstream 0.5kb upstream 500 false Chr1: 11273295-11273794 Arabidopsis thaliana
AT1G31490 0.5kb downstream 0.5kb downstream 2567 true Chr1: 11270728-11273294 Arabidopsis thaliana
AT1G31490 0.5kb downstream 0.5kb downstream 500 false Chr1: 11270728-11271227 Arabidopsis thaliana
AT1G31490 1.0kb upstream 1.0kb upstream 3067 true Chr1: 11271228-11274294 Arabidopsis thaliana
AT1G31490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11273295-11274294 Arabidopsis thaliana
AT1G31490 1.0kb downstream 1.0kb downstream 3067 true Chr1: 11270228-11273294 Arabidopsis thaliana
AT1G31490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11270228-11271227 Arabidopsis thaliana
AT1G31490 2.0kb upstream 2.0kb upstream 4067 true Chr1: 11271228-11275294 Arabidopsis thaliana
AT1G31490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11273295-11275294 Arabidopsis thaliana
AT1G31490 2.0kb downstream 2.0kb downstream 4067 true Chr1: 11269228-11273294 Arabidopsis thaliana
AT1G31490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11269228-11271227 Arabidopsis thaliana
AT1G31490 5.0kb upstream 5.0kb upstream 7067 true Chr1: 11271228-11278294 Arabidopsis thaliana
AT1G31490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11273295-11278294 Arabidopsis thaliana
AT1G31490 5.0kb downstream 5.0kb downstream 7067 true Chr1: 11266228-11273294 Arabidopsis thaliana
AT1G31490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11266228-11271227 Arabidopsis thaliana
AT1G31490 10.0kb upstream 10.0kb upstream 12067 true Chr1: 11271228-11283294 Arabidopsis thaliana
AT1G31490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11273295-11283294 Arabidopsis thaliana
AT1G31490 10.0kb downstream 10.0kb downstream 12067 true Chr1: 11261228-11273294 Arabidopsis thaliana
AT1G31490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11261228-11271227 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369633 5261 Brassicaceae View MSA
123829524 5264 Brassicales-Malvales View MSA
124342757 5266 SBM View MSA
124242615 5268 Malvidae View MSA
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.441        
cufflinks 2.017       High
cufflinks 0.304        
cufflinks 2.076       High
cufflinks 0.243     Low Low
cufflinks 1.31        

0 Strain