Gene : GOA A. thaliana TAIR10
Primary Identifier:  ? AT1G31140 Defline:  (1 of 39) PF00319//PF01486 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // K-box region (K-box)
Genomic Order:  3082 Name:  ? AT1G31140
Secondary Identifier:  ? PAC:19657777
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31140 0.5kb upstream 0.5kb upstream 2293 true Chr1: 11117493-11119785 Arabidopsis thaliana
AT1G31140 0.5kb upstream 0.5kb upstream 500 false Chr1: 11117493-11117992 Arabidopsis thaliana
AT1G31140 0.5kb downstream 0.5kb downstream 2293 true Chr1: 11117993-11120285 Arabidopsis thaliana
AT1G31140 0.5kb downstream 0.5kb downstream 500 false Chr1: 11119786-11120285 Arabidopsis thaliana
AT1G31140 1.0kb upstream 1.0kb upstream 2793 true Chr1: 11116993-11119785 Arabidopsis thaliana
AT1G31140 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11116993-11117992 Arabidopsis thaliana
AT1G31140 1.0kb downstream 1.0kb downstream 2793 true Chr1: 11117993-11120785 Arabidopsis thaliana
AT1G31140 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11119786-11120785 Arabidopsis thaliana
AT1G31140 2.0kb upstream 2.0kb upstream 3793 true Chr1: 11115993-11119785 Arabidopsis thaliana
AT1G31140 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11115993-11117992 Arabidopsis thaliana
AT1G31140 2.0kb downstream 2.0kb downstream 3793 true Chr1: 11117993-11121785 Arabidopsis thaliana
AT1G31140 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11119786-11121785 Arabidopsis thaliana
AT1G31140 5.0kb upstream 5.0kb upstream 6793 true Chr1: 11112993-11119785 Arabidopsis thaliana
AT1G31140 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11112993-11117992 Arabidopsis thaliana
AT1G31140 5.0kb downstream 5.0kb downstream 6793 true Chr1: 11117993-11124785 Arabidopsis thaliana
AT1G31140 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11119786-11124785 Arabidopsis thaliana
AT1G31140 10.0kb upstream 10.0kb upstream 11793 true Chr1: 11107993-11119785 Arabidopsis thaliana
AT1G31140 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11107993-11117992 Arabidopsis thaliana
AT1G31140 10.0kb downstream 10.0kb downstream 11793 true Chr1: 11117993-11129785 Arabidopsis thaliana
AT1G31140 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11119786-11129785 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075379 5270 Rosid View MSA
122329047 5261 Brassicaceae Singleton cluster - no MSA
123770365 5264 Brassicales-Malvales Singleton cluster - no MSA
124268906 5266 SBM Singleton cluster - no MSA
124255206 5268 Malvidae View MSA
123748976 5271 Pentapetalae View MSA
122793472 5272 Eudicot View MSA
122046677 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.134     Low  
cufflinks 0.013     Low Low
cufflinks 0.145     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  

0 Strain