Gene : BRX A. thaliana TAIR10
Primary Identifier:  ? AT1G31880 Defline:  (1 of 2) PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED
Genomic Order:  3159 Name:  ? AT1G31880
Secondary Identifier:  ? PAC:19657105
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31880 0.5kb upstream 0.5kb upstream 5200 true Chr1: 11444990-11450189 Arabidopsis thaliana
AT1G31880 0.5kb upstream 0.5kb upstream 500 false Chr1: 11444990-11445489 Arabidopsis thaliana
AT1G31880 0.5kb downstream 0.5kb downstream 5200 true Chr1: 11445490-11450689 Arabidopsis thaliana
AT1G31880 0.5kb downstream 0.5kb downstream 500 false Chr1: 11450190-11450689 Arabidopsis thaliana
AT1G31880 1.0kb upstream 1.0kb upstream 5700 true Chr1: 11444490-11450189 Arabidopsis thaliana
AT1G31880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11444490-11445489 Arabidopsis thaliana
AT1G31880 1.0kb downstream 1.0kb downstream 5700 true Chr1: 11445490-11451189 Arabidopsis thaliana
AT1G31880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11450190-11451189 Arabidopsis thaliana
AT1G31880 2.0kb upstream 2.0kb upstream 6700 true Chr1: 11443490-11450189 Arabidopsis thaliana
AT1G31880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11443490-11445489 Arabidopsis thaliana
AT1G31880 2.0kb downstream 2.0kb downstream 6700 true Chr1: 11445490-11452189 Arabidopsis thaliana
AT1G31880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11450190-11452189 Arabidopsis thaliana
AT1G31880 5.0kb upstream 5.0kb upstream 9700 true Chr1: 11440490-11450189 Arabidopsis thaliana
AT1G31880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11440490-11445489 Arabidopsis thaliana
AT1G31880 5.0kb downstream 5.0kb downstream 9700 true Chr1: 11445490-11455189 Arabidopsis thaliana
AT1G31880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11450190-11455189 Arabidopsis thaliana
AT1G31880 10.0kb upstream 10.0kb upstream 14700 true Chr1: 11435490-11450189 Arabidopsis thaliana
AT1G31880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11435490-11445489 Arabidopsis thaliana
AT1G31880 10.0kb downstream 10.0kb downstream 14700 true Chr1: 11445490-11460189 Arabidopsis thaliana
AT1G31880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11450190-11460189 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364357 5261 Brassicaceae View MSA
123834222 5264 Brassicales-Malvales View MSA
124350044 5266 SBM View MSA
124249794 5268 Malvidae View MSA
124062514 5270 Rosid View MSA
123739591 5271 Pentapetalae View MSA
122790552 5272 Eudicot View MSA
122046038 5273 Angiosperm View MSA
121349129 5274 Embryophyte View MSA
123381183 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.463        
cufflinks 1.575        
cufflinks 0.283       Low
cufflinks 1.73       High
cufflinks 0.371        
cufflinks 1.442        

0 Strain