Gene : AT1G30870 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31235:SF8 - PEROXIDASE 7 Genomic Order:  3058
Name:  ? AT1G30870 Secondary Identifier:  ? PAC:19654292
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30870 0.5kb upstream 0.5kb upstream 2039 true Chr1: 10990985-10993023 Arabidopsis thaliana
AT1G30870 0.5kb upstream 0.5kb upstream 500 false Chr1: 10990985-10991484 Arabidopsis thaliana
AT1G30870 0.5kb downstream 0.5kb downstream 2039 true Chr1: 10991485-10993523 Arabidopsis thaliana
AT1G30870 0.5kb downstream 0.5kb downstream 500 false Chr1: 10993024-10993523 Arabidopsis thaliana
AT1G30870 1.0kb upstream 1.0kb upstream 2539 true Chr1: 10990485-10993023 Arabidopsis thaliana
AT1G30870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10990485-10991484 Arabidopsis thaliana
AT1G30870 1.0kb downstream 1.0kb downstream 2539 true Chr1: 10991485-10994023 Arabidopsis thaliana
AT1G30870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10993024-10994023 Arabidopsis thaliana
AT1G30870 2.0kb upstream 2.0kb upstream 3539 true Chr1: 10989485-10993023 Arabidopsis thaliana
AT1G30870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10989485-10991484 Arabidopsis thaliana
AT1G30870 2.0kb downstream 2.0kb downstream 3539 true Chr1: 10991485-10995023 Arabidopsis thaliana
AT1G30870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10993024-10995023 Arabidopsis thaliana
AT1G30870 5.0kb upstream 5.0kb upstream 6539 true Chr1: 10986485-10993023 Arabidopsis thaliana
AT1G30870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10986485-10991484 Arabidopsis thaliana
AT1G30870 5.0kb downstream 5.0kb downstream 6539 true Chr1: 10991485-10998023 Arabidopsis thaliana
AT1G30870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10993024-10998023 Arabidopsis thaliana
AT1G30870 10.0kb upstream 10.0kb upstream 11539 true Chr1: 10981485-10993023 Arabidopsis thaliana
AT1G30870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10981485-10991484 Arabidopsis thaliana
AT1G30870 10.0kb downstream 10.0kb downstream 11539 true Chr1: 10991485-11003023 Arabidopsis thaliana
AT1G30870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10993024-11003023 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361049 5261 Brassicaceae View MSA
123829210 5264 Brassicales-Malvales View MSA
124347313 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.812        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.182        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.152       High

0 Strain