Gene : AT1G29810 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12599:SF2 - PCD/DCOH-LIKE PROTEIN 2 Genomic Order:  2945
Name:  ? AT1G29810 Secondary Identifier:  ? PAC:19658125
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29810 0.5kb upstream 0.5kb upstream 2633 true Chr1: 10435374-10438006 Arabidopsis thaliana
AT1G29810 0.5kb upstream 0.5kb upstream 500 false Chr1: 10437507-10438006 Arabidopsis thaliana
AT1G29810 0.5kb downstream 0.5kb downstream 2633 true Chr1: 10434874-10437506 Arabidopsis thaliana
AT1G29810 0.5kb downstream 0.5kb downstream 500 false Chr1: 10434874-10435373 Arabidopsis thaliana
AT1G29810 1.0kb upstream 1.0kb upstream 3133 true Chr1: 10435374-10438506 Arabidopsis thaliana
AT1G29810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10437507-10438506 Arabidopsis thaliana
AT1G29810 1.0kb downstream 1.0kb downstream 3133 true Chr1: 10434374-10437506 Arabidopsis thaliana
AT1G29810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10434374-10435373 Arabidopsis thaliana
AT1G29810 2.0kb upstream 2.0kb upstream 4133 true Chr1: 10435374-10439506 Arabidopsis thaliana
AT1G29810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10437507-10439506 Arabidopsis thaliana
AT1G29810 2.0kb downstream 2.0kb downstream 4133 true Chr1: 10433374-10437506 Arabidopsis thaliana
AT1G29810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10433374-10435373 Arabidopsis thaliana
AT1G29810 5.0kb upstream 5.0kb upstream 7133 true Chr1: 10435374-10442506 Arabidopsis thaliana
AT1G29810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10437507-10442506 Arabidopsis thaliana
AT1G29810 5.0kb downstream 5.0kb downstream 7133 true Chr1: 10430374-10437506 Arabidopsis thaliana
AT1G29810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10430374-10435373 Arabidopsis thaliana
AT1G29810 10.0kb upstream 10.0kb upstream 12133 true Chr1: 10435374-10447506 Arabidopsis thaliana
AT1G29810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10437507-10447506 Arabidopsis thaliana
AT1G29810 10.0kb downstream 10.0kb downstream 12133 true Chr1: 10425374-10437506 Arabidopsis thaliana
AT1G29810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10425374-10435373 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360633 5261 Brassicaceae View MSA
123834657 5264 Brassicales-Malvales View MSA
124341865 5266 SBM View MSA
124240527 5268 Malvidae View MSA
124068632 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.365        
cufflinks 5.275        
cufflinks 6.047        
cufflinks 4.854        
cufflinks 6.906       High
cufflinks 4.007       Low

0 Strain