Gene : ERD2 A. thaliana TAIR10
Primary Identifier:  ? AT1G29330 Defline:  (1 of 1) PTHR10585//PTHR10585:SF26 - ER LUMEN PROTEIN RETAINING RECEPTOR // ER LUMEN PROTEIN RETAINING RECEPTOR
Genomic Order:  2896 Name:  ? AT1G29330
Secondary Identifier:  ? PAC:19649208
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29330 0.5kb upstream 0.5kb upstream 3365 true Chr1: 10258248-10261612 Arabidopsis thaliana
AT1G29330 0.5kb upstream 0.5kb upstream 500 false Chr1: 10261113-10261612 Arabidopsis thaliana
AT1G29330 0.5kb downstream 0.5kb downstream 3365 true Chr1: 10257748-10261112 Arabidopsis thaliana
AT1G29330 0.5kb downstream 0.5kb downstream 500 false Chr1: 10257748-10258247 Arabidopsis thaliana
AT1G29330 1.0kb upstream 1.0kb upstream 3865 true Chr1: 10258248-10262112 Arabidopsis thaliana
AT1G29330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10261113-10262112 Arabidopsis thaliana
AT1G29330 1.0kb downstream 1.0kb downstream 3865 true Chr1: 10257248-10261112 Arabidopsis thaliana
AT1G29330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10257248-10258247 Arabidopsis thaliana
AT1G29330 2.0kb upstream 2.0kb upstream 4865 true Chr1: 10258248-10263112 Arabidopsis thaliana
AT1G29330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10261113-10263112 Arabidopsis thaliana
AT1G29330 2.0kb downstream 2.0kb downstream 4865 true Chr1: 10256248-10261112 Arabidopsis thaliana
AT1G29330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10256248-10258247 Arabidopsis thaliana
AT1G29330 5.0kb upstream 5.0kb upstream 7865 true Chr1: 10258248-10266112 Arabidopsis thaliana
AT1G29330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10261113-10266112 Arabidopsis thaliana
AT1G29330 5.0kb downstream 5.0kb downstream 7865 true Chr1: 10253248-10261112 Arabidopsis thaliana
AT1G29330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10253248-10258247 Arabidopsis thaliana
AT1G29330 10.0kb upstream 10.0kb upstream 12865 true Chr1: 10258248-10271112 Arabidopsis thaliana
AT1G29330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10261113-10271112 Arabidopsis thaliana
AT1G29330 10.0kb downstream 10.0kb downstream 12865 true Chr1: 10248248-10261112 Arabidopsis thaliana
AT1G29330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10248248-10258247 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378749 5261 Brassicaceae View MSA
123839451 5264 Brassicales-Malvales View MSA
124351450 5266 SBM View MSA
124253206 5268 Malvidae View MSA
124069792 5270 Rosid View MSA
123751554 5271 Pentapetalae View MSA
122794159 5272 Eudicot View MSA
122048237 5273 Angiosperm View MSA
121347107 5274 Embryophyte View MSA
123428809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.106       Low
cufflinks 10.672        
cufflinks 5.932       Low
cufflinks 12.779       High
cufflinks 8.11        
cufflinks 10.644        

0 Strain