Gene : AT1G49380 A. thaliana TAIR10
Defline:  (1 of 1) K07399 - cytochrome c biogenesis protein (resB, ccs1) Genomic Order:  3964
Name:  ? AT1G49380 Secondary Identifier:  ? PAC:19656271
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49380 0.5kb upstream 0.5kb upstream 3322 true Chr1: 18276207-18279528 Arabidopsis thaliana
AT1G49380 0.5kb upstream 0.5kb upstream 500 false Chr1: 18276207-18276706 Arabidopsis thaliana
AT1G49380 0.5kb downstream 0.5kb downstream 3322 true Chr1: 18276707-18280028 Arabidopsis thaliana
AT1G49380 0.5kb downstream 0.5kb downstream 500 false Chr1: 18279529-18280028 Arabidopsis thaliana
AT1G49380 1.0kb upstream 1.0kb upstream 3822 true Chr1: 18275707-18279528 Arabidopsis thaliana
AT1G49380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18275707-18276706 Arabidopsis thaliana
AT1G49380 1.0kb downstream 1.0kb downstream 3822 true Chr1: 18276707-18280528 Arabidopsis thaliana
AT1G49380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18279529-18280528 Arabidopsis thaliana
AT1G49380 2.0kb upstream 2.0kb upstream 4822 true Chr1: 18274707-18279528 Arabidopsis thaliana
AT1G49380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18274707-18276706 Arabidopsis thaliana
AT1G49380 2.0kb downstream 2.0kb downstream 4822 true Chr1: 18276707-18281528 Arabidopsis thaliana
AT1G49380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18279529-18281528 Arabidopsis thaliana
AT1G49380 5.0kb upstream 5.0kb upstream 7822 true Chr1: 18271707-18279528 Arabidopsis thaliana
AT1G49380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18271707-18276706 Arabidopsis thaliana
AT1G49380 5.0kb downstream 5.0kb downstream 7822 true Chr1: 18276707-18284528 Arabidopsis thaliana
AT1G49380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18279529-18284528 Arabidopsis thaliana
AT1G49380 10.0kb upstream 10.0kb upstream 12822 true Chr1: 18266707-18279528 Arabidopsis thaliana
AT1G49380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18266707-18276706 Arabidopsis thaliana
AT1G49380 10.0kb downstream 10.0kb downstream 12822 true Chr1: 18276707-18289528 Arabidopsis thaliana
AT1G49380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18279529-18289528 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367350 5261 Brassicaceae View MSA
123841594 5264 Brassicales-Malvales View MSA
124339684 5266 SBM View MSA
124241893 5268 Malvidae View MSA
124068876 5270 Rosid View MSA
123740681 5271 Pentapetalae View MSA
122796764 5272 Eudicot View MSA
122043580 5273 Angiosperm View MSA
121347633 5274 Embryophyte View MSA
123425145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.637       High
cufflinks 2.641        
cufflinks 26.492     High  
cufflinks 2.449        
cufflinks 20.414        
cufflinks 2.5        

0 Strain