Gene : WPP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G47200 Defline:  (1 of 3) PTHR34362//PTHR34362:SF1 - FAMILY NOT NAMED // WPP DOMAIN-CONTAINING PROTEIN 1-RELATED
Genomic Order:  3742 Name:  ? AT1G47200
Secondary Identifier:  ? PAC:19656500
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47200 0.5kb upstream 0.5kb upstream 1287 true Chr1: 17298031-17299317 Arabidopsis thaliana
AT1G47200 0.5kb upstream 0.5kb upstream 500 false Chr1: 17298818-17299317 Arabidopsis thaliana
AT1G47200 0.5kb downstream 0.5kb downstream 1287 true Chr1: 17297531-17298817 Arabidopsis thaliana
AT1G47200 0.5kb downstream 0.5kb downstream 500 false Chr1: 17297531-17298030 Arabidopsis thaliana
AT1G47200 1.0kb upstream 1.0kb upstream 1787 true Chr1: 17298031-17299817 Arabidopsis thaliana
AT1G47200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17298818-17299817 Arabidopsis thaliana
AT1G47200 1.0kb downstream 1.0kb downstream 1787 true Chr1: 17297031-17298817 Arabidopsis thaliana
AT1G47200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17297031-17298030 Arabidopsis thaliana
AT1G47200 2.0kb upstream 2.0kb upstream 2787 true Chr1: 17298031-17300817 Arabidopsis thaliana
AT1G47200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17298818-17300817 Arabidopsis thaliana
AT1G47200 2.0kb downstream 2.0kb downstream 2787 true Chr1: 17296031-17298817 Arabidopsis thaliana
AT1G47200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17296031-17298030 Arabidopsis thaliana
AT1G47200 5.0kb upstream 5.0kb upstream 5787 true Chr1: 17298031-17303817 Arabidopsis thaliana
AT1G47200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17298818-17303817 Arabidopsis thaliana
AT1G47200 5.0kb downstream 5.0kb downstream 5787 true Chr1: 17293031-17298817 Arabidopsis thaliana
AT1G47200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17293031-17298030 Arabidopsis thaliana
AT1G47200 10.0kb upstream 10.0kb upstream 10787 true Chr1: 17298031-17308817 Arabidopsis thaliana
AT1G47200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17298818-17308817 Arabidopsis thaliana
AT1G47200 10.0kb downstream 10.0kb downstream 10787 true Chr1: 17288031-17298817 Arabidopsis thaliana
AT1G47200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17288031-17298030 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380019 5261 Brassicaceae View MSA
123836389 5264 Brassicales-Malvales View MSA
124343063 5266 SBM View MSA
124242425 5268 Malvidae View MSA
124061872 5270 Rosid View MSA
123739220 5271 Pentapetalae View MSA
122792231 5272 Eudicot View MSA
122045089 5273 Angiosperm View MSA
121310396 5274 Embryophyte View MSA
123347890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.529     High  
cufflinks 73.828     High  
cufflinks 35.934     High  
cufflinks 66.321     High  
cufflinks 34.757     High Low
cufflinks 85.46     High High

0 Strain