Gene : PMI1 A. thaliana TAIR10
Primary Identifier:  ? AT1G42550 Defline:  (1 of 1) PTHR33414//PTHR33414:SF2 - FAMILY NOT NAMED // PLASTID MOVEMENT IMPAIRED1
Genomic Order:  3582 Name:  ? AT1G42550
Secondary Identifier:  ? PAC:19649336
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G42550 0.5kb upstream 0.5kb upstream 3439 true Chr1: 15976514-15979952 Arabidopsis thaliana
AT1G42550 0.5kb upstream 0.5kb upstream 500 false Chr1: 15976514-15977013 Arabidopsis thaliana
AT1G42550 0.5kb downstream 0.5kb downstream 3439 true Chr1: 15977014-15980452 Arabidopsis thaliana
AT1G42550 0.5kb downstream 0.5kb downstream 500 false Chr1: 15979953-15980452 Arabidopsis thaliana
AT1G42550 1.0kb upstream 1.0kb upstream 3939 true Chr1: 15976014-15979952 Arabidopsis thaliana
AT1G42550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 15976014-15977013 Arabidopsis thaliana
AT1G42550 1.0kb downstream 1.0kb downstream 3939 true Chr1: 15977014-15980952 Arabidopsis thaliana
AT1G42550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 15979953-15980952 Arabidopsis thaliana
AT1G42550 2.0kb upstream 2.0kb upstream 4939 true Chr1: 15975014-15979952 Arabidopsis thaliana
AT1G42550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 15975014-15977013 Arabidopsis thaliana
AT1G42550 2.0kb downstream 2.0kb downstream 4939 true Chr1: 15977014-15981952 Arabidopsis thaliana
AT1G42550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 15979953-15981952 Arabidopsis thaliana
AT1G42550 5.0kb upstream 5.0kb upstream 7939 true Chr1: 15972014-15979952 Arabidopsis thaliana
AT1G42550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 15972014-15977013 Arabidopsis thaliana
AT1G42550 5.0kb downstream 5.0kb downstream 7939 true Chr1: 15977014-15984952 Arabidopsis thaliana
AT1G42550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 15979953-15984952 Arabidopsis thaliana
AT1G42550 10.0kb upstream 10.0kb upstream 12939 true Chr1: 15967014-15979952 Arabidopsis thaliana
AT1G42550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 15967014-15977013 Arabidopsis thaliana
AT1G42550 10.0kb downstream 10.0kb downstream 12939 true Chr1: 15977014-15989952 Arabidopsis thaliana
AT1G42550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 15979953-15989952 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364949 5261 Brassicaceae View MSA
123834174 5264 Brassicales-Malvales View MSA
124337715 5266 SBM View MSA
124239279 5268 Malvidae View MSA
124066768 5270 Rosid View MSA
123738803 5271 Pentapetalae View MSA
122793466 5272 Eudicot View MSA
122045060 5273 Angiosperm View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.898     High  
cufflinks 0.201     Low  
cufflinks 42.943     High  
cufflinks 0.221     Low  
cufflinks 34.075     High  
cufflinks 0.151     Low  

0 Strain