Gene : AT1G35830 A. thaliana TAIR10
Defline:  (1 of 32) PF05678 - VQ motif (VQ) Genomic Order:  3502
Name:  ? AT1G35830 Secondary Identifier:  ? PAC:19656188
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G35830 0.5kb upstream 0.5kb upstream 1409 true Chr1: 13321214-13322622 Arabidopsis thaliana
AT1G35830 0.5kb upstream 0.5kb upstream 500 false Chr1: 13322123-13322622 Arabidopsis thaliana
AT1G35830 0.5kb downstream 0.5kb downstream 1409 true Chr1: 13320714-13322122 Arabidopsis thaliana
AT1G35830 0.5kb downstream 0.5kb downstream 500 false Chr1: 13320714-13321213 Arabidopsis thaliana
AT1G35830 1.0kb upstream 1.0kb upstream 1909 true Chr1: 13321214-13323122 Arabidopsis thaliana
AT1G35830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 13322123-13323122 Arabidopsis thaliana
AT1G35830 1.0kb downstream 1.0kb downstream 1909 true Chr1: 13320214-13322122 Arabidopsis thaliana
AT1G35830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 13320214-13321213 Arabidopsis thaliana
AT1G35830 2.0kb upstream 2.0kb upstream 2909 true Chr1: 13321214-13324122 Arabidopsis thaliana
AT1G35830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 13322123-13324122 Arabidopsis thaliana
AT1G35830 2.0kb downstream 2.0kb downstream 2909 true Chr1: 13319214-13322122 Arabidopsis thaliana
AT1G35830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 13319214-13321213 Arabidopsis thaliana
AT1G35830 5.0kb upstream 5.0kb upstream 5909 true Chr1: 13321214-13327122 Arabidopsis thaliana
AT1G35830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 13322123-13327122 Arabidopsis thaliana
AT1G35830 5.0kb downstream 5.0kb downstream 5909 true Chr1: 13316214-13322122 Arabidopsis thaliana
AT1G35830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 13316214-13321213 Arabidopsis thaliana
AT1G35830 10.0kb upstream 10.0kb upstream 10909 true Chr1: 13321214-13332122 Arabidopsis thaliana
AT1G35830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 13322123-13332122 Arabidopsis thaliana
AT1G35830 10.0kb downstream 10.0kb downstream 10909 true Chr1: 13311214-13322122 Arabidopsis thaliana
AT1G35830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 13311214-13321213 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376502 5261 Brassicaceae View MSA
123801271 5264 Brassicales-Malvales View MSA
124349722 5266 SBM View MSA
124245170 5268 Malvidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.723        
cufflinks 15.843       High
cufflinks 0.567       Low
cufflinks 13.055        
cufflinks 0.73        
cufflinks 10.553        

0 Strain