Gene : AT1G20810 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10516:SF319 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC Genomic Order:  2096
Name:  ? AT1G20810 Secondary Identifier:  ? PAC:19652470
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20810 0.5kb upstream 0.5kb upstream 2061 true Chr1: 7231506-7233566 Arabidopsis thaliana
AT1G20810 0.5kb upstream 0.5kb upstream 500 false Chr1: 7231506-7232005 Arabidopsis thaliana
AT1G20810 0.5kb downstream 0.5kb downstream 2061 true Chr1: 7232006-7234066 Arabidopsis thaliana
AT1G20810 0.5kb downstream 0.5kb downstream 500 false Chr1: 7233567-7234066 Arabidopsis thaliana
AT1G20810 1.0kb upstream 1.0kb upstream 2561 true Chr1: 7231006-7233566 Arabidopsis thaliana
AT1G20810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7231006-7232005 Arabidopsis thaliana
AT1G20810 1.0kb downstream 1.0kb downstream 2561 true Chr1: 7232006-7234566 Arabidopsis thaliana
AT1G20810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7233567-7234566 Arabidopsis thaliana
AT1G20810 2.0kb upstream 2.0kb upstream 3561 true Chr1: 7230006-7233566 Arabidopsis thaliana
AT1G20810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7230006-7232005 Arabidopsis thaliana
AT1G20810 2.0kb downstream 2.0kb downstream 3561 true Chr1: 7232006-7235566 Arabidopsis thaliana
AT1G20810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7233567-7235566 Arabidopsis thaliana
AT1G20810 5.0kb upstream 5.0kb upstream 6561 true Chr1: 7227006-7233566 Arabidopsis thaliana
AT1G20810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7227006-7232005 Arabidopsis thaliana
AT1G20810 5.0kb downstream 5.0kb downstream 6561 true Chr1: 7232006-7238566 Arabidopsis thaliana
AT1G20810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7233567-7238566 Arabidopsis thaliana
AT1G20810 10.0kb upstream 10.0kb upstream 11561 true Chr1: 7222006-7233566 Arabidopsis thaliana
AT1G20810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7222006-7232005 Arabidopsis thaliana
AT1G20810 10.0kb downstream 10.0kb downstream 11561 true Chr1: 7232006-7243566 Arabidopsis thaliana
AT1G20810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7233567-7243566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367381 5261 Brassicaceae View MSA
123833086 5264 Brassicales-Malvales View MSA
124340491 5266 SBM View MSA
124237402 5268 Malvidae View MSA
124060964 5270 Rosid View MSA
123739964 5271 Pentapetalae View MSA
122791539 5272 Eudicot View MSA
122046491 5273 Angiosperm View MSA
121345976 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.357     High  
cufflinks 5.702        
cufflinks 38.907     High High
cufflinks 5.107        
cufflinks 28.696     High  
cufflinks 3.957       Low

0 Strain