Gene : AT1G19130 A. thaliana TAIR10
Defline:  (1 of 1) PF06172 - Cupin superfamily (DUF985) (Cupin_5) Genomic Order:  1926
Name:  ? AT1G19130 Secondary Identifier:  ? PAC:19657349
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19130 0.5kb upstream 0.5kb upstream 1789 true Chr1: 6609325-6611113 Arabidopsis thaliana
AT1G19130 0.5kb upstream 0.5kb upstream 500 false Chr1: 6610614-6611113 Arabidopsis thaliana
AT1G19130 0.5kb downstream 0.5kb downstream 1789 true Chr1: 6608825-6610613 Arabidopsis thaliana
AT1G19130 0.5kb downstream 0.5kb downstream 500 false Chr1: 6608825-6609324 Arabidopsis thaliana
AT1G19130 1.0kb upstream 1.0kb upstream 2289 true Chr1: 6609325-6611613 Arabidopsis thaliana
AT1G19130 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6610614-6611613 Arabidopsis thaliana
AT1G19130 1.0kb downstream 1.0kb downstream 2289 true Chr1: 6608325-6610613 Arabidopsis thaliana
AT1G19130 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6608325-6609324 Arabidopsis thaliana
AT1G19130 2.0kb upstream 2.0kb upstream 3289 true Chr1: 6609325-6612613 Arabidopsis thaliana
AT1G19130 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6610614-6612613 Arabidopsis thaliana
AT1G19130 2.0kb downstream 2.0kb downstream 3289 true Chr1: 6607325-6610613 Arabidopsis thaliana
AT1G19130 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6607325-6609324 Arabidopsis thaliana
AT1G19130 5.0kb upstream 5.0kb upstream 6289 true Chr1: 6609325-6615613 Arabidopsis thaliana
AT1G19130 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6610614-6615613 Arabidopsis thaliana
AT1G19130 5.0kb downstream 5.0kb downstream 6289 true Chr1: 6604325-6610613 Arabidopsis thaliana
AT1G19130 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6604325-6609324 Arabidopsis thaliana
AT1G19130 10.0kb upstream 10.0kb upstream 11289 true Chr1: 6609325-6620613 Arabidopsis thaliana
AT1G19130 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6610614-6620613 Arabidopsis thaliana
AT1G19130 10.0kb downstream 10.0kb downstream 11289 true Chr1: 6599325-6610613 Arabidopsis thaliana
AT1G19130 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6599325-6609324 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366294 5261 Brassicaceae View MSA
123830294 5264 Brassicales-Malvales View MSA
124337843 5266 SBM View MSA
124241366 5268 Malvidae View MSA
124063762 5270 Rosid View MSA
123736862 5271 Pentapetalae View MSA
122786910 5272 Eudicot View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.797     High  
cufflinks 42.305     High High
cufflinks 29.677     High Low
cufflinks 41.21     High  
cufflinks 31.134     High  
cufflinks 39.114     High  

0 Strain