Gene : AT1G18720 A. thaliana TAIR10
Defline:  (1 of 2) KOG3292 - Predicted membrane protein Genomic Order:  1883
Name:  ? AT1G18720 Secondary Identifier:  ? PAC:19649221
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18720 0.5kb upstream 0.5kb upstream 2431 true Chr1: 6457821-6460251 Arabidopsis thaliana
AT1G18720 0.5kb upstream 0.5kb upstream 500 false Chr1: 6459752-6460251 Arabidopsis thaliana
AT1G18720 0.5kb downstream 0.5kb downstream 2431 true Chr1: 6457321-6459751 Arabidopsis thaliana
AT1G18720 0.5kb downstream 0.5kb downstream 500 false Chr1: 6457321-6457820 Arabidopsis thaliana
AT1G18720 1.0kb upstream 1.0kb upstream 2931 true Chr1: 6457821-6460751 Arabidopsis thaliana
AT1G18720 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6459752-6460751 Arabidopsis thaliana
AT1G18720 1.0kb downstream 1.0kb downstream 2931 true Chr1: 6456821-6459751 Arabidopsis thaliana
AT1G18720 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6456821-6457820 Arabidopsis thaliana
AT1G18720 2.0kb upstream 2.0kb upstream 3931 true Chr1: 6457821-6461751 Arabidopsis thaliana
AT1G18720 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6459752-6461751 Arabidopsis thaliana
AT1G18720 2.0kb downstream 2.0kb downstream 3931 true Chr1: 6455821-6459751 Arabidopsis thaliana
AT1G18720 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6455821-6457820 Arabidopsis thaliana
AT1G18720 5.0kb upstream 5.0kb upstream 6931 true Chr1: 6457821-6464751 Arabidopsis thaliana
AT1G18720 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6459752-6464751 Arabidopsis thaliana
AT1G18720 5.0kb downstream 5.0kb downstream 6931 true Chr1: 6452821-6459751 Arabidopsis thaliana
AT1G18720 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6452821-6457820 Arabidopsis thaliana
AT1G18720 10.0kb upstream 10.0kb upstream 11931 true Chr1: 6457821-6469751 Arabidopsis thaliana
AT1G18720 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6459752-6469751 Arabidopsis thaliana
AT1G18720 10.0kb downstream 10.0kb downstream 11931 true Chr1: 6447821-6459751 Arabidopsis thaliana
AT1G18720 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6447821-6457820 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
122376216 5261 Brassicaceae View MSA
123832852 5264 Brassicales-Malvales View MSA
124346903 5266 SBM View MSA
124248288 5268 Malvidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.089     High High
cufflinks 45.46     High  
cufflinks 47.449     High  
cufflinks 39.543     High Low
cufflinks 47.661     High  
cufflinks 38.198     High Low

0 Strain