Gene : AT1G18660 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23327//PTHR23327:SF9 - RING FINGER PROTEIN 127 // ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN Genomic Order:  1877
Name:  ? AT1G18660 Secondary Identifier:  ? PAC:19654272
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18660 0.5kb upstream 0.5kb upstream 5264 true Chr1: 6420617-6425880 Arabidopsis thaliana
AT1G18660 0.5kb upstream 0.5kb upstream 500 false Chr1: 6420617-6421116 Arabidopsis thaliana
AT1G18660 0.5kb downstream 0.5kb downstream 5264 true Chr1: 6421117-6426380 Arabidopsis thaliana
AT1G18660 0.5kb downstream 0.5kb downstream 500 false Chr1: 6425881-6426380 Arabidopsis thaliana
AT1G18660 1.0kb upstream 1.0kb upstream 5764 true Chr1: 6420117-6425880 Arabidopsis thaliana
AT1G18660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6420117-6421116 Arabidopsis thaliana
AT1G18660 1.0kb downstream 1.0kb downstream 5764 true Chr1: 6421117-6426880 Arabidopsis thaliana
AT1G18660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6425881-6426880 Arabidopsis thaliana
AT1G18660 2.0kb upstream 2.0kb upstream 6764 true Chr1: 6419117-6425880 Arabidopsis thaliana
AT1G18660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6419117-6421116 Arabidopsis thaliana
AT1G18660 2.0kb downstream 2.0kb downstream 6764 true Chr1: 6421117-6427880 Arabidopsis thaliana
AT1G18660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6425881-6427880 Arabidopsis thaliana
AT1G18660 5.0kb upstream 5.0kb upstream 9764 true Chr1: 6416117-6425880 Arabidopsis thaliana
AT1G18660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6416117-6421116 Arabidopsis thaliana
AT1G18660 5.0kb downstream 5.0kb downstream 9764 true Chr1: 6421117-6430880 Arabidopsis thaliana
AT1G18660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6425881-6430880 Arabidopsis thaliana
AT1G18660 10.0kb upstream 10.0kb upstream 14764 true Chr1: 6411117-6425880 Arabidopsis thaliana
AT1G18660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6411117-6421116 Arabidopsis thaliana
AT1G18660 10.0kb downstream 10.0kb downstream 14764 true Chr1: 6421117-6435880 Arabidopsis thaliana
AT1G18660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6425881-6435880 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375549 5261 Brassicaceae View MSA
123840530 5264 Brassicales-Malvales View MSA
124345117 5266 SBM View MSA
124241219 5268 Malvidae View MSA
124060590 5270 Rosid View MSA
123742205 5271 Pentapetalae View MSA
122791083 5272 Eudicot View MSA
122048007 5273 Angiosperm View MSA
121347127 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.507       High
cufflinks 1.931        
cufflinks 2.485       High
cufflinks 1.873        
cufflinks 2.195        
cufflinks 1.845        

0 Strain