Gene : PGDH A. thaliana TAIR10
Primary Identifier:  ? AT1G17745 Defline:  (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase
Genomic Order:  1788 Name:  ? AT1G17745
Secondary Identifier:  ? PAC:19649810
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana SER-GLYSYN-PWY Arabidopsis thaliana pathologic  
Athaliana SERSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17745 0.5kb upstream 0.5kb upstream 4802 true Chr1: 6100464-6105265 Arabidopsis thaliana
AT1G17745 0.5kb upstream 0.5kb upstream 500 false Chr1: 6100464-6100963 Arabidopsis thaliana
AT1G17745 0.5kb downstream 0.5kb downstream 4802 true Chr1: 6100964-6105765 Arabidopsis thaliana
AT1G17745 0.5kb downstream 0.5kb downstream 500 false Chr1: 6105266-6105765 Arabidopsis thaliana
AT1G17745 1.0kb upstream 1.0kb upstream 5302 true Chr1: 6099964-6105265 Arabidopsis thaliana
AT1G17745 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6099964-6100963 Arabidopsis thaliana
AT1G17745 1.0kb downstream 1.0kb downstream 5302 true Chr1: 6100964-6106265 Arabidopsis thaliana
AT1G17745 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6105266-6106265 Arabidopsis thaliana
AT1G17745 2.0kb upstream 2.0kb upstream 6302 true Chr1: 6098964-6105265 Arabidopsis thaliana
AT1G17745 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6098964-6100963 Arabidopsis thaliana
AT1G17745 2.0kb downstream 2.0kb downstream 6302 true Chr1: 6100964-6107265 Arabidopsis thaliana
AT1G17745 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6105266-6107265 Arabidopsis thaliana
AT1G17745 5.0kb upstream 5.0kb upstream 9302 true Chr1: 6095964-6105265 Arabidopsis thaliana
AT1G17745 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6095964-6100963 Arabidopsis thaliana
AT1G17745 5.0kb downstream 5.0kb downstream 9302 true Chr1: 6100964-6110265 Arabidopsis thaliana
AT1G17745 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6105266-6110265 Arabidopsis thaliana
AT1G17745 10.0kb upstream 10.0kb upstream 14302 true Chr1: 6090964-6105265 Arabidopsis thaliana
AT1G17745 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6090964-6100963 Arabidopsis thaliana
AT1G17745 10.0kb downstream 10.0kb downstream 14302 true Chr1: 6100964-6115265 Arabidopsis thaliana
AT1G17745 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6105266-6115265 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363628 5261 Brassicaceae View MSA
123837054 5264 Brassicales-Malvales View MSA
124346998 5266 SBM View MSA
124246038 5268 Malvidae View MSA
124069252 5270 Rosid View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.678        
cufflinks 30.08     High  
cufflinks 16.53       Low
cufflinks 38.255     High  
cufflinks 28.878     High  
cufflinks 38.14     High  

0 Strain