Gene : ATJ1 A. thaliana TAIR10
Primary Identifier:  ? AT1G28210 Defline:  (1 of 1) PTHR24078:SF247 - CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL
Genomic Order:  2799 Name:  ? AT1G28210
Secondary Identifier:  ? PAC:19653215
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28210 0.5kb upstream 0.5kb upstream 6113 true Chr1: 9854046-9860158 Arabidopsis thaliana
AT1G28210 0.5kb upstream 0.5kb upstream 500 false Chr1: 9854046-9854545 Arabidopsis thaliana
AT1G28210 0.5kb downstream 0.5kb downstream 6113 true Chr1: 9854546-9860658 Arabidopsis thaliana
AT1G28210 0.5kb downstream 0.5kb downstream 500 false Chr1: 9860159-9860658 Arabidopsis thaliana
AT1G28210 1.0kb upstream 1.0kb upstream 6613 true Chr1: 9853546-9860158 Arabidopsis thaliana
AT1G28210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9853546-9854545 Arabidopsis thaliana
AT1G28210 1.0kb downstream 1.0kb downstream 6613 true Chr1: 9854546-9861158 Arabidopsis thaliana
AT1G28210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9860159-9861158 Arabidopsis thaliana
AT1G28210 2.0kb upstream 2.0kb upstream 7613 true Chr1: 9852546-9860158 Arabidopsis thaliana
AT1G28210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9852546-9854545 Arabidopsis thaliana
AT1G28210 2.0kb downstream 2.0kb downstream 7613 true Chr1: 9854546-9862158 Arabidopsis thaliana
AT1G28210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9860159-9862158 Arabidopsis thaliana
AT1G28210 5.0kb upstream 5.0kb upstream 10613 true Chr1: 9849546-9860158 Arabidopsis thaliana
AT1G28210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9849546-9854545 Arabidopsis thaliana
AT1G28210 5.0kb downstream 5.0kb downstream 10613 true Chr1: 9854546-9865158 Arabidopsis thaliana
AT1G28210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9860159-9865158 Arabidopsis thaliana
AT1G28210 10.0kb upstream 10.0kb upstream 15613 true Chr1: 9844546-9860158 Arabidopsis thaliana
AT1G28210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9844546-9854545 Arabidopsis thaliana
AT1G28210 10.0kb downstream 10.0kb downstream 15613 true Chr1: 9854546-9870158 Arabidopsis thaliana
AT1G28210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9860159-9870158 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366766 5261 Brassicaceae View MSA
123832634 5264 Brassicales-Malvales View MSA
124338818 5266 SBM View MSA
124242830 5268 Malvidae View MSA
124062124 5270 Rosid View MSA
123748060 5271 Pentapetalae View MSA
122787497 5272 Eudicot View MSA
122049089 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121311242 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.434        
cufflinks 0.45        
cufflinks 0.281       Low
cufflinks 0.455        
cufflinks 0.274       Low
cufflinks 0.421        

0 Strain