Gene : AT1G27880 A. thaliana TAIR10
Defline:  (1 of 1) K10730 - ATP-dependent DNA helicase Q4 [EC:3.6.4.12] (RECQL4) Genomic Order:  2764
Name:  ? AT1G27880 Secondary Identifier:  ? PAC:19654205
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27880 0.5kb upstream 0.5kb upstream 5666 true Chr1: 9708424-9714089 Arabidopsis thaliana
AT1G27880 0.5kb upstream 0.5kb upstream 500 false Chr1: 9708424-9708923 Arabidopsis thaliana
AT1G27880 0.5kb downstream 0.5kb downstream 5666 true Chr1: 9708924-9714589 Arabidopsis thaliana
AT1G27880 0.5kb downstream 0.5kb downstream 500 false Chr1: 9714090-9714589 Arabidopsis thaliana
AT1G27880 1.0kb upstream 1.0kb upstream 6166 true Chr1: 9707924-9714089 Arabidopsis thaliana
AT1G27880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9707924-9708923 Arabidopsis thaliana
AT1G27880 1.0kb downstream 1.0kb downstream 6166 true Chr1: 9708924-9715089 Arabidopsis thaliana
AT1G27880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9714090-9715089 Arabidopsis thaliana
AT1G27880 2.0kb upstream 2.0kb upstream 7166 true Chr1: 9706924-9714089 Arabidopsis thaliana
AT1G27880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9706924-9708923 Arabidopsis thaliana
AT1G27880 2.0kb downstream 2.0kb downstream 7166 true Chr1: 9708924-9716089 Arabidopsis thaliana
AT1G27880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9714090-9716089 Arabidopsis thaliana
AT1G27880 5.0kb upstream 5.0kb upstream 10166 true Chr1: 9703924-9714089 Arabidopsis thaliana
AT1G27880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9703924-9708923 Arabidopsis thaliana
AT1G27880 5.0kb downstream 5.0kb downstream 10166 true Chr1: 9708924-9719089 Arabidopsis thaliana
AT1G27880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9714090-9719089 Arabidopsis thaliana
AT1G27880 10.0kb upstream 10.0kb upstream 15166 true Chr1: 9698924-9714089 Arabidopsis thaliana
AT1G27880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9698924-9708923 Arabidopsis thaliana
AT1G27880 10.0kb downstream 10.0kb downstream 15166 true Chr1: 9708924-9724089 Arabidopsis thaliana
AT1G27880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9714090-9724089 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366283 5261 Brassicaceae View MSA
123829207 5264 Brassicales-Malvales View MSA
124340669 5266 SBM View MSA
124238802 5268 Malvidae View MSA
124063497 5270 Rosid View MSA
123747334 5271 Pentapetalae View MSA
122787698 5272 Eudicot View MSA
122045833 5273 Angiosperm View MSA
121348099 5274 Embryophyte View MSA
123427743 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.6        
cufflinks 1.182        
cufflinks 0.499        
cufflinks 1.309        
cufflinks 0.389       Low
cufflinks 1.447       High

0 Strain