Gene : SAT32 A. thaliana TAIR10
Primary Identifier:  ? AT1G27760 Defline:  (1 of 1) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR
Genomic Order:  2757 Name:  ? AT1G27760
Secondary Identifier:  ? PAC:19651331
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27760 0.5kb upstream 0.5kb upstream 3533 true Chr1: 9668084-9671616 Arabidopsis thaliana
AT1G27760 0.5kb upstream 0.5kb upstream 500 false Chr1: 9668084-9668583 Arabidopsis thaliana
AT1G27760 0.5kb downstream 0.5kb downstream 3533 true Chr1: 9668584-9672116 Arabidopsis thaliana
AT1G27760 0.5kb downstream 0.5kb downstream 500 false Chr1: 9671617-9672116 Arabidopsis thaliana
AT1G27760 1.0kb upstream 1.0kb upstream 4033 true Chr1: 9667584-9671616 Arabidopsis thaliana
AT1G27760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9667584-9668583 Arabidopsis thaliana
AT1G27760 1.0kb downstream 1.0kb downstream 4033 true Chr1: 9668584-9672616 Arabidopsis thaliana
AT1G27760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9671617-9672616 Arabidopsis thaliana
AT1G27760 2.0kb upstream 2.0kb upstream 5033 true Chr1: 9666584-9671616 Arabidopsis thaliana
AT1G27760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9666584-9668583 Arabidopsis thaliana
AT1G27760 2.0kb downstream 2.0kb downstream 5033 true Chr1: 9668584-9673616 Arabidopsis thaliana
AT1G27760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9671617-9673616 Arabidopsis thaliana
AT1G27760 5.0kb upstream 5.0kb upstream 8033 true Chr1: 9663584-9671616 Arabidopsis thaliana
AT1G27760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9663584-9668583 Arabidopsis thaliana
AT1G27760 5.0kb downstream 5.0kb downstream 8033 true Chr1: 9668584-9676616 Arabidopsis thaliana
AT1G27760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9671617-9676616 Arabidopsis thaliana
AT1G27760 10.0kb upstream 10.0kb upstream 13033 true Chr1: 9658584-9671616 Arabidopsis thaliana
AT1G27760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9658584-9668583 Arabidopsis thaliana
AT1G27760 10.0kb downstream 10.0kb downstream 13033 true Chr1: 9668584-9681616 Arabidopsis thaliana
AT1G27760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9671617-9681616 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368126 5261 Brassicaceae View MSA
123835663 5264 Brassicales-Malvales View MSA
124344407 5266 SBM View MSA
124242024 5268 Malvidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.462        
cufflinks 8.113        
cufflinks 6.248       Low
cufflinks 8.861       High
cufflinks 6.548        
cufflinks 8.512        

0 Strain