Gene : AT1G27210 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31355:SF3 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  2696
Name:  ? AT1G27210 Secondary Identifier:  ? PAC:19655710
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27210 0.5kb upstream 0.5kb upstream 3159 true Chr1: 9455368-9458526 Arabidopsis thaliana
AT1G27210 0.5kb upstream 0.5kb upstream 500 false Chr1: 9458027-9458526 Arabidopsis thaliana
AT1G27210 0.5kb downstream 0.5kb downstream 3159 true Chr1: 9454868-9458026 Arabidopsis thaliana
AT1G27210 0.5kb downstream 0.5kb downstream 500 false Chr1: 9454868-9455367 Arabidopsis thaliana
AT1G27210 1.0kb upstream 1.0kb upstream 3659 true Chr1: 9455368-9459026 Arabidopsis thaliana
AT1G27210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9458027-9459026 Arabidopsis thaliana
AT1G27210 1.0kb downstream 1.0kb downstream 3659 true Chr1: 9454368-9458026 Arabidopsis thaliana
AT1G27210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9454368-9455367 Arabidopsis thaliana
AT1G27210 2.0kb upstream 2.0kb upstream 4659 true Chr1: 9455368-9460026 Arabidopsis thaliana
AT1G27210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9458027-9460026 Arabidopsis thaliana
AT1G27210 2.0kb downstream 2.0kb downstream 4659 true Chr1: 9453368-9458026 Arabidopsis thaliana
AT1G27210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9453368-9455367 Arabidopsis thaliana
AT1G27210 5.0kb upstream 5.0kb upstream 7659 true Chr1: 9455368-9463026 Arabidopsis thaliana
AT1G27210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9458027-9463026 Arabidopsis thaliana
AT1G27210 5.0kb downstream 5.0kb downstream 7659 true Chr1: 9450368-9458026 Arabidopsis thaliana
AT1G27210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9450368-9455367 Arabidopsis thaliana
AT1G27210 10.0kb upstream 10.0kb upstream 12659 true Chr1: 9455368-9468026 Arabidopsis thaliana
AT1G27210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9458027-9468026 Arabidopsis thaliana
AT1G27210 10.0kb downstream 10.0kb downstream 12659 true Chr1: 9445368-9458026 Arabidopsis thaliana
AT1G27210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9445368-9455367 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122366849 5261 Brassicaceae View MSA
123836121 5264 Brassicales-Malvales View MSA
124339851 5266 SBM View MSA
124252373 5268 Malvidae View MSA
124065090 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0        
cufflinks 6.635       Low
cufflinks 16.619       High
cufflinks 8.503        
cufflinks 14.835        
cufflinks 7.627        

0 Strain