Gene : KCR2 A. thaliana TAIR10

Primary Identifier:  ? AT1G24470 Defline:  (1 of 3) KOG1014 - 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3
Genomic Order:  2485 Name:  ? AT1G24470
Secondary Identifier:  ? PAC:19657068

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5080 Arabidopsis thaliana pathologic  
Athaliana PWY-6433 Arabidopsis thaliana pathologic  
Athaliana PWY-6598 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-7601 Arabidopsis thaliana pathologic  
Athaliana PWY-7606 Arabidopsis thaliana pathologic  
Athaliana PWY-7619 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24470 0.5kb upstream 0.5kb upstream 2853 true Chr1: 8673556-8676408 Arabidopsis thaliana
AT1G24470 0.5kb upstream 0.5kb upstream 500 false Chr1: 8673556-8674055 Arabidopsis thaliana
AT1G24470 0.5kb downstream 0.5kb downstream 2853 true Chr1: 8674056-8676908 Arabidopsis thaliana
AT1G24470 0.5kb downstream 0.5kb downstream 500 false Chr1: 8676409-8676908 Arabidopsis thaliana
AT1G24470 1.0kb upstream 1.0kb upstream 3353 true Chr1: 8673056-8676408 Arabidopsis thaliana
AT1G24470 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8673056-8674055 Arabidopsis thaliana
AT1G24470 1.0kb downstream 1.0kb downstream 3353 true Chr1: 8674056-8677408 Arabidopsis thaliana
AT1G24470 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8676409-8677408 Arabidopsis thaliana
AT1G24470 2.0kb upstream 2.0kb upstream 4353 true Chr1: 8672056-8676408 Arabidopsis thaliana
AT1G24470 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8672056-8674055 Arabidopsis thaliana
AT1G24470 2.0kb downstream 2.0kb downstream 4353 true Chr1: 8674056-8678408 Arabidopsis thaliana
AT1G24470 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8676409-8678408 Arabidopsis thaliana
AT1G24470 5.0kb upstream 5.0kb upstream 7353 true Chr1: 8669056-8676408 Arabidopsis thaliana
AT1G24470 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8669056-8674055 Arabidopsis thaliana
AT1G24470 5.0kb downstream 5.0kb downstream 7353 true Chr1: 8674056-8681408 Arabidopsis thaliana
AT1G24470 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8676409-8681408 Arabidopsis thaliana
AT1G24470 10.0kb upstream 10.0kb upstream 12353 true Chr1: 8664056-8676408 Arabidopsis thaliana
AT1G24470 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8664056-8674055 Arabidopsis thaliana
AT1G24470 10.0kb downstream 10.0kb downstream 12353 true Chr1: 8674056-8686408 Arabidopsis thaliana
AT1G24470 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8676409-8686408 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363619 5261 Brassicaceae View MSA
123830884 5264 Brassicales-Malvales View MSA
124343782 5266 SBM View MSA
124240925 5268 Malvidae View MSA
124050409 5270 Rosid View MSA
123741518 5271 Pentapetalae View MSA
122787012 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.669       High
cufflinks 0.019     Low Low
cufflinks 0.233     Low  
cufflinks 0.036     Low  
cufflinks 0.529       High
cufflinks 0.02     Low  

0 Strain