Gene : AT1G24160 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31358:SF6 - F3I6.9 PROTEIN Genomic Order:  2451
Name:  ? AT1G24160 Secondary Identifier:  ? PAC:19657710
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24160 0.5kb upstream 0.5kb upstream 3645 true Chr1: 8553411-8557055 Arabidopsis thaliana
AT1G24160 0.5kb upstream 0.5kb upstream 500 false Chr1: 8556556-8557055 Arabidopsis thaliana
AT1G24160 0.5kb downstream 0.5kb downstream 3645 true Chr1: 8552911-8556555 Arabidopsis thaliana
AT1G24160 0.5kb downstream 0.5kb downstream 500 false Chr1: 8552911-8553410 Arabidopsis thaliana
AT1G24160 1.0kb upstream 1.0kb upstream 4145 true Chr1: 8553411-8557555 Arabidopsis thaliana
AT1G24160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8556556-8557555 Arabidopsis thaliana
AT1G24160 1.0kb downstream 1.0kb downstream 4145 true Chr1: 8552411-8556555 Arabidopsis thaliana
AT1G24160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8552411-8553410 Arabidopsis thaliana
AT1G24160 2.0kb upstream 2.0kb upstream 5145 true Chr1: 8553411-8558555 Arabidopsis thaliana
AT1G24160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8556556-8558555 Arabidopsis thaliana
AT1G24160 2.0kb downstream 2.0kb downstream 5145 true Chr1: 8551411-8556555 Arabidopsis thaliana
AT1G24160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8551411-8553410 Arabidopsis thaliana
AT1G24160 5.0kb upstream 5.0kb upstream 8145 true Chr1: 8553411-8561555 Arabidopsis thaliana
AT1G24160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8556556-8561555 Arabidopsis thaliana
AT1G24160 5.0kb downstream 5.0kb downstream 8145 true Chr1: 8548411-8556555 Arabidopsis thaliana
AT1G24160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8548411-8553410 Arabidopsis thaliana
AT1G24160 10.0kb upstream 10.0kb upstream 13145 true Chr1: 8553411-8566555 Arabidopsis thaliana
AT1G24160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8556556-8566555 Arabidopsis thaliana
AT1G24160 10.0kb downstream 10.0kb downstream 13145 true Chr1: 8543411-8556555 Arabidopsis thaliana
AT1G24160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8543411-8553410 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372234 5261 Brassicaceae View MSA
123840891 5264 Brassicales-Malvales View MSA
124338948 5266 SBM View MSA
124242528 5268 Malvidae View MSA
124060962 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.588        
cufflinks 9.131       Low
cufflinks 22.354       High
cufflinks 10.261        
cufflinks 21.378        
cufflinks 9.861        

0 Strain