Gene : AT1G65120 A. thaliana TAIR10
Defline:  (1 of 13) PTHR22975:SF9 - F6D8.33-RELATED Genomic Order:  5437
Name:  ? AT1G65120 Secondary Identifier:  ? PAC:19658143
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65120 0.5kb upstream 0.5kb upstream 5226 true Chr1: 24191348-24196573 Arabidopsis thaliana
AT1G65120 0.5kb upstream 0.5kb upstream 500 false Chr1: 24196074-24196573 Arabidopsis thaliana
AT1G65120 0.5kb downstream 0.5kb downstream 5226 true Chr1: 24190848-24196073 Arabidopsis thaliana
AT1G65120 0.5kb downstream 0.5kb downstream 500 false Chr1: 24190848-24191347 Arabidopsis thaliana
AT1G65120 1.0kb upstream 1.0kb upstream 5726 true Chr1: 24191348-24197073 Arabidopsis thaliana
AT1G65120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24196074-24197073 Arabidopsis thaliana
AT1G65120 1.0kb downstream 1.0kb downstream 5726 true Chr1: 24190348-24196073 Arabidopsis thaliana
AT1G65120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24190348-24191347 Arabidopsis thaliana
AT1G65120 2.0kb upstream 2.0kb upstream 6726 true Chr1: 24191348-24198073 Arabidopsis thaliana
AT1G65120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24196074-24198073 Arabidopsis thaliana
AT1G65120 2.0kb downstream 2.0kb downstream 6726 true Chr1: 24189348-24196073 Arabidopsis thaliana
AT1G65120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24189348-24191347 Arabidopsis thaliana
AT1G65120 5.0kb upstream 5.0kb upstream 9726 true Chr1: 24191348-24201073 Arabidopsis thaliana
AT1G65120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24196074-24201073 Arabidopsis thaliana
AT1G65120 5.0kb downstream 5.0kb downstream 9726 true Chr1: 24186348-24196073 Arabidopsis thaliana
AT1G65120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24186348-24191347 Arabidopsis thaliana
AT1G65120 10.0kb upstream 10.0kb upstream 14726 true Chr1: 24191348-24206073 Arabidopsis thaliana
AT1G65120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24196074-24206073 Arabidopsis thaliana
AT1G65120 10.0kb downstream 10.0kb downstream 14726 true Chr1: 24181348-24196073 Arabidopsis thaliana
AT1G65120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24181348-24191347 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376331 5261 Brassicaceae View MSA
123801212 5264 Brassicales-Malvales View MSA
124298541 5266 SBM View MSA
124150163 5268 Malvidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236     Low  
cufflinks 0.582        
cufflinks 0.175     Low  
cufflinks 0.519        
cufflinks 0.128     Low Low
cufflinks 0.585        

0 Strain