Gene : LACS3 A. thaliana TAIR10
Primary Identifier:  ? AT1G64400 Defline:  (1 of 3) 2.7.8.11//6.2.1.3 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase // Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase
Genomic Order:  5362 Name:  ? AT1G64400
Secondary Identifier:  ? PAC:19650035
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Sequence Feature Displayer

Ontology Annotation Displayer

16 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1121 Arabidopsis thaliana pathologic  
Athaliana PWY-321 Arabidopsis thaliana pathologic  
Athaliana PWY-5136 Arabidopsis thaliana pathologic  
Athaliana PWY-5143 Arabidopsis thaliana pathologic  
Athaliana PWY-5147 Arabidopsis thaliana pathologic  
Athaliana PWY-5156 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-5885 Arabidopsis thaliana pathologic  
Athaliana PWY-5971 Arabidopsis thaliana pathologic  
Athaliana PWY-5989 Arabidopsis thaliana pathologic  
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  
Athaliana PWY66-389 Arabidopsis thaliana pathologic  
Athaliana PWY-6733 Arabidopsis thaliana pathologic  
Athaliana PWY-6803 Arabidopsis thaliana pathologic  
Athaliana PWY-7625 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64400 0.5kb upstream 0.5kb upstream 4686 true Chr1: 23915598-23920283 Arabidopsis thaliana
AT1G64400 0.5kb upstream 0.5kb upstream 500 false Chr1: 23919784-23920283 Arabidopsis thaliana
AT1G64400 0.5kb downstream 0.5kb downstream 4686 true Chr1: 23915098-23919783 Arabidopsis thaliana
AT1G64400 0.5kb downstream 0.5kb downstream 500 false Chr1: 23915098-23915597 Arabidopsis thaliana
AT1G64400 1.0kb upstream 1.0kb upstream 5186 true Chr1: 23915598-23920783 Arabidopsis thaliana
AT1G64400 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23919784-23920783 Arabidopsis thaliana
AT1G64400 1.0kb downstream 1.0kb downstream 5186 true Chr1: 23914598-23919783 Arabidopsis thaliana
AT1G64400 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23914598-23915597 Arabidopsis thaliana
AT1G64400 2.0kb upstream 2.0kb upstream 6186 true Chr1: 23915598-23921783 Arabidopsis thaliana
AT1G64400 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23919784-23921783 Arabidopsis thaliana
AT1G64400 2.0kb downstream 2.0kb downstream 6186 true Chr1: 23913598-23919783 Arabidopsis thaliana
AT1G64400 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23913598-23915597 Arabidopsis thaliana
AT1G64400 5.0kb upstream 5.0kb upstream 9186 true Chr1: 23915598-23924783 Arabidopsis thaliana
AT1G64400 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23919784-23924783 Arabidopsis thaliana
AT1G64400 5.0kb downstream 5.0kb downstream 9186 true Chr1: 23910598-23919783 Arabidopsis thaliana
AT1G64400 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23910598-23915597 Arabidopsis thaliana
AT1G64400 10.0kb upstream 10.0kb upstream 14186 true Chr1: 23915598-23929783 Arabidopsis thaliana
AT1G64400 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23919784-23929783 Arabidopsis thaliana
AT1G64400 10.0kb downstream 10.0kb downstream 14186 true Chr1: 23905598-23919783 Arabidopsis thaliana
AT1G64400 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23905598-23915597 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375079 5261 Brassicaceae View MSA
123800873 5264 Brassicales-Malvales View MSA
124298235 5266 SBM View MSA
124149930 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.743       High
cufflinks 0.982       Low
cufflinks 5.996        
cufflinks 0.994       Low
cufflinks 6.771        
cufflinks 2.493        

0 Strain