Gene : AT1G63220 A. thaliana TAIR10
Defline:  (1 of 22) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  5238
Name:  ? AT1G63220 Secondary Identifier:  ? PAC:19650411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63220 0.5kb upstream 0.5kb upstream 2034 true Chr1: 23448419-23450452 Arabidopsis thaliana
AT1G63220 0.5kb upstream 0.5kb upstream 500 false Chr1: 23448419-23448918 Arabidopsis thaliana
AT1G63220 0.5kb downstream 0.5kb downstream 2034 true Chr1: 23448919-23450952 Arabidopsis thaliana
AT1G63220 0.5kb downstream 0.5kb downstream 500 false Chr1: 23450453-23450952 Arabidopsis thaliana
AT1G63220 1.0kb upstream 1.0kb upstream 2534 true Chr1: 23447919-23450452 Arabidopsis thaliana
AT1G63220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23447919-23448918 Arabidopsis thaliana
AT1G63220 1.0kb downstream 1.0kb downstream 2534 true Chr1: 23448919-23451452 Arabidopsis thaliana
AT1G63220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23450453-23451452 Arabidopsis thaliana
AT1G63220 2.0kb upstream 2.0kb upstream 3534 true Chr1: 23446919-23450452 Arabidopsis thaliana
AT1G63220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23446919-23448918 Arabidopsis thaliana
AT1G63220 2.0kb downstream 2.0kb downstream 3534 true Chr1: 23448919-23452452 Arabidopsis thaliana
AT1G63220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23450453-23452452 Arabidopsis thaliana
AT1G63220 5.0kb upstream 5.0kb upstream 6534 true Chr1: 23443919-23450452 Arabidopsis thaliana
AT1G63220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23443919-23448918 Arabidopsis thaliana
AT1G63220 5.0kb downstream 5.0kb downstream 6534 true Chr1: 23448919-23455452 Arabidopsis thaliana
AT1G63220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23450453-23455452 Arabidopsis thaliana
AT1G63220 10.0kb upstream 10.0kb upstream 11534 true Chr1: 23438919-23450452 Arabidopsis thaliana
AT1G63220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23438919-23448918 Arabidopsis thaliana
AT1G63220 10.0kb downstream 10.0kb downstream 11534 true Chr1: 23448919-23460452 Arabidopsis thaliana
AT1G63220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23450453-23460452 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376068 5261 Brassicaceae View MSA
123829140 5264 Brassicales-Malvales View MSA
124337026 5266 SBM View MSA
124240151 5268 Malvidae View MSA
124062814 5270 Rosid View MSA
123751939 5271 Pentapetalae View MSA
122788067 5272 Eudicot View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.552        
cufflinks 13.251        
cufflinks 2.723        
cufflinks 14.688        
cufflinks 2.462       Low
cufflinks 16.848       High

0 Strain