Gene : SCO1 A. thaliana TAIR10
Primary Identifier:  ? AT1G62750 Defline:  (1 of 1) PTHR23115//PTHR23115:SF66 - TRANSLATION FACTOR // RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL
Genomic Order:  5182 Name:  ? AT1G62750
Secondary Identifier:  ? PAC:19649709
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62750 0.5kb upstream 0.5kb upstream 3514 true Chr1: 23233434-23236947 Arabidopsis thaliana
AT1G62750 0.5kb upstream 0.5kb upstream 500 false Chr1: 23236448-23236947 Arabidopsis thaliana
AT1G62750 0.5kb downstream 0.5kb downstream 3514 true Chr1: 23232934-23236447 Arabidopsis thaliana
AT1G62750 0.5kb downstream 0.5kb downstream 500 false Chr1: 23232934-23233433 Arabidopsis thaliana
AT1G62750 1.0kb upstream 1.0kb upstream 4014 true Chr1: 23233434-23237447 Arabidopsis thaliana
AT1G62750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23236448-23237447 Arabidopsis thaliana
AT1G62750 1.0kb downstream 1.0kb downstream 4014 true Chr1: 23232434-23236447 Arabidopsis thaliana
AT1G62750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23232434-23233433 Arabidopsis thaliana
AT1G62750 2.0kb upstream 2.0kb upstream 5014 true Chr1: 23233434-23238447 Arabidopsis thaliana
AT1G62750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23236448-23238447 Arabidopsis thaliana
AT1G62750 2.0kb downstream 2.0kb downstream 5014 true Chr1: 23231434-23236447 Arabidopsis thaliana
AT1G62750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23231434-23233433 Arabidopsis thaliana
AT1G62750 5.0kb upstream 5.0kb upstream 8014 true Chr1: 23233434-23241447 Arabidopsis thaliana
AT1G62750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23236448-23241447 Arabidopsis thaliana
AT1G62750 5.0kb downstream 5.0kb downstream 8014 true Chr1: 23228434-23236447 Arabidopsis thaliana
AT1G62750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23228434-23233433 Arabidopsis thaliana
AT1G62750 10.0kb upstream 10.0kb upstream 13014 true Chr1: 23233434-23246447 Arabidopsis thaliana
AT1G62750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23236448-23246447 Arabidopsis thaliana
AT1G62750 10.0kb downstream 10.0kb downstream 13014 true Chr1: 23223434-23236447 Arabidopsis thaliana
AT1G62750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23223434-23233433 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360769 5261 Brassicaceae View MSA
123829729 5264 Brassicales-Malvales View MSA
124342453 5266 SBM View MSA
124237912 5268 Malvidae View MSA
124064302 5270 Rosid View MSA
123736503 5271 Pentapetalae View MSA
122785777 5272 Eudicot View MSA
122041610 5273 Angiosperm View MSA
121345701 5274 Embryophyte View MSA
123424136 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 162.131     High  
cufflinks 5.22        
cufflinks 183.124     High  
cufflinks 5.115        
cufflinks 146.428     High  
cufflinks 3.474       Low

0 Strain