Gene : CDS1 A. thaliana TAIR10
Primary Identifier:  ? AT1G62430 Defline:  (1 of 3) K00981 - phosphatidate cytidylyltransferase (E2.7.7.41, CDS1, CDS2, cdsA)
Genomic Order:  5154 Name:  ? AT1G62430
Secondary Identifier:  ? PAC:19654444
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1319 Arabidopsis thaliana pathologic  
Athaliana PWY4FS-7 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62430 0.5kb upstream 0.5kb upstream 4036 true Chr1: 23105941-23109976 Arabidopsis thaliana
AT1G62430 0.5kb upstream 0.5kb upstream 500 false Chr1: 23109477-23109976 Arabidopsis thaliana
AT1G62430 0.5kb downstream 0.5kb downstream 4036 true Chr1: 23105441-23109476 Arabidopsis thaliana
AT1G62430 0.5kb downstream 0.5kb downstream 500 false Chr1: 23105441-23105940 Arabidopsis thaliana
AT1G62430 1.0kb upstream 1.0kb upstream 4536 true Chr1: 23105941-23110476 Arabidopsis thaliana
AT1G62430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23109477-23110476 Arabidopsis thaliana
AT1G62430 1.0kb downstream 1.0kb downstream 4536 true Chr1: 23104941-23109476 Arabidopsis thaliana
AT1G62430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23104941-23105940 Arabidopsis thaliana
AT1G62430 2.0kb upstream 2.0kb upstream 5536 true Chr1: 23105941-23111476 Arabidopsis thaliana
AT1G62430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23109477-23111476 Arabidopsis thaliana
AT1G62430 2.0kb downstream 2.0kb downstream 5536 true Chr1: 23103941-23109476 Arabidopsis thaliana
AT1G62430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23103941-23105940 Arabidopsis thaliana
AT1G62430 5.0kb upstream 5.0kb upstream 8536 true Chr1: 23105941-23114476 Arabidopsis thaliana
AT1G62430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23109477-23114476 Arabidopsis thaliana
AT1G62430 5.0kb downstream 5.0kb downstream 8536 true Chr1: 23100941-23109476 Arabidopsis thaliana
AT1G62430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23100941-23105940 Arabidopsis thaliana
AT1G62430 10.0kb upstream 10.0kb upstream 13536 true Chr1: 23105941-23119476 Arabidopsis thaliana
AT1G62430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23109477-23119476 Arabidopsis thaliana
AT1G62430 10.0kb downstream 10.0kb downstream 13536 true Chr1: 23095941-23109476 Arabidopsis thaliana
AT1G62430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23095941-23105940 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360242 5261 Brassicaceae View MSA
123841401 5264 Brassicales-Malvales View MSA
124337420 5266 SBM View MSA
124243920 5268 Malvidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.234       High
cufflinks 15.979       Low
cufflinks 19.544        
cufflinks 16.855        
cufflinks 20.321        
cufflinks 18.39        

0 Strain