Gene : AT1G61890 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11206//PTHR11206:SF140 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  5095
Name:  ? AT1G61890 Secondary Identifier:  ? PAC:19657870
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61890 0.5kb upstream 0.5kb upstream 4011 true Chr1: 22867770-22871780 Arabidopsis thaliana
AT1G61890 0.5kb upstream 0.5kb upstream 500 false Chr1: 22871281-22871780 Arabidopsis thaliana
AT1G61890 0.5kb downstream 0.5kb downstream 4011 true Chr1: 22867270-22871280 Arabidopsis thaliana
AT1G61890 0.5kb downstream 0.5kb downstream 500 false Chr1: 22867270-22867769 Arabidopsis thaliana
AT1G61890 1.0kb upstream 1.0kb upstream 4511 true Chr1: 22867770-22872280 Arabidopsis thaliana
AT1G61890 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22871281-22872280 Arabidopsis thaliana
AT1G61890 1.0kb downstream 1.0kb downstream 4511 true Chr1: 22866770-22871280 Arabidopsis thaliana
AT1G61890 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22866770-22867769 Arabidopsis thaliana
AT1G61890 2.0kb upstream 2.0kb upstream 5511 true Chr1: 22867770-22873280 Arabidopsis thaliana
AT1G61890 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22871281-22873280 Arabidopsis thaliana
AT1G61890 2.0kb downstream 2.0kb downstream 5511 true Chr1: 22865770-22871280 Arabidopsis thaliana
AT1G61890 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22865770-22867769 Arabidopsis thaliana
AT1G61890 5.0kb upstream 5.0kb upstream 8511 true Chr1: 22867770-22876280 Arabidopsis thaliana
AT1G61890 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22871281-22876280 Arabidopsis thaliana
AT1G61890 5.0kb downstream 5.0kb downstream 8511 true Chr1: 22862770-22871280 Arabidopsis thaliana
AT1G61890 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22862770-22867769 Arabidopsis thaliana
AT1G61890 10.0kb upstream 10.0kb upstream 13511 true Chr1: 22867770-22881280 Arabidopsis thaliana
AT1G61890 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22871281-22881280 Arabidopsis thaliana
AT1G61890 10.0kb downstream 10.0kb downstream 13511 true Chr1: 22857770-22871280 Arabidopsis thaliana
AT1G61890 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22857770-22867769 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374149 5261 Brassicaceae View MSA
123800689 5264 Brassicales-Malvales View MSA
124298069 5266 SBM View MSA
124149807 5268 Malvidae View MSA
124071772 5270 Rosid View MSA
123747983 5271 Pentapetalae View MSA
122786922 5272 Eudicot View MSA
122050249 5273 Angiosperm View MSA
121311823 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.881     High Low
cufflinks 259.593     High  
cufflinks 204.649     High  
cufflinks 168.288     High  
cufflinks 121.592     High  
cufflinks 230.574     High  

0 Strain