Gene : SD1-29 A. thaliana TAIR10
Primary Identifier:  ? AT1G61380 Defline:  (1 of 15) PTHR27002:SF84 - ATP BINDING / PROTEIN KINASE-RELATED
Genomic Order:  5041 Name:  ? AT1G61380
Secondary Identifier:  ? PAC:19655729
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61380 0.5kb upstream 0.5kb upstream 3950 true Chr1: 22646072-22650021 Arabidopsis thaliana
AT1G61380 0.5kb upstream 0.5kb upstream 500 false Chr1: 22649522-22650021 Arabidopsis thaliana
AT1G61380 0.5kb downstream 0.5kb downstream 3950 true Chr1: 22645572-22649521 Arabidopsis thaliana
AT1G61380 0.5kb downstream 0.5kb downstream 500 false Chr1: 22645572-22646071 Arabidopsis thaliana
AT1G61380 1.0kb upstream 1.0kb upstream 4450 true Chr1: 22646072-22650521 Arabidopsis thaliana
AT1G61380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22649522-22650521 Arabidopsis thaliana
AT1G61380 1.0kb downstream 1.0kb downstream 4450 true Chr1: 22645072-22649521 Arabidopsis thaliana
AT1G61380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22645072-22646071 Arabidopsis thaliana
AT1G61380 2.0kb upstream 2.0kb upstream 5450 true Chr1: 22646072-22651521 Arabidopsis thaliana
AT1G61380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22649522-22651521 Arabidopsis thaliana
AT1G61380 2.0kb downstream 2.0kb downstream 5450 true Chr1: 22644072-22649521 Arabidopsis thaliana
AT1G61380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22644072-22646071 Arabidopsis thaliana
AT1G61380 5.0kb upstream 5.0kb upstream 8450 true Chr1: 22646072-22654521 Arabidopsis thaliana
AT1G61380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22649522-22654521 Arabidopsis thaliana
AT1G61380 5.0kb downstream 5.0kb downstream 8450 true Chr1: 22641072-22649521 Arabidopsis thaliana
AT1G61380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22641072-22646071 Arabidopsis thaliana
AT1G61380 10.0kb upstream 10.0kb upstream 13450 true Chr1: 22646072-22659521 Arabidopsis thaliana
AT1G61380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22649522-22659521 Arabidopsis thaliana
AT1G61380 10.0kb downstream 10.0kb downstream 13450 true Chr1: 22636072-22649521 Arabidopsis thaliana
AT1G61380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22636072-22646071 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377937 5261 Brassicaceae View MSA
123841209 5264 Brassicales-Malvales View MSA
124349890 5266 SBM View MSA
124251825 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.987       High
cufflinks 2.251        
cufflinks 4.954        
cufflinks 2.052        
cufflinks 7.853       High
cufflinks 2.251        

0 Strain