Gene : AT1G68520 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Genomic Order:  5800
Name:  ? AT1G68520 Secondary Identifier:  ? PAC:19651758
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68520 0.5kb upstream 0.5kb upstream 2294 true Chr1: 25709114-25711407 Arabidopsis thaliana
AT1G68520 0.5kb upstream 0.5kb upstream 500 false Chr1: 25710908-25711407 Arabidopsis thaliana
AT1G68520 0.5kb downstream 0.5kb downstream 2294 true Chr1: 25708614-25710907 Arabidopsis thaliana
AT1G68520 0.5kb downstream 0.5kb downstream 500 false Chr1: 25708614-25709113 Arabidopsis thaliana
AT1G68520 1.0kb upstream 1.0kb upstream 2794 true Chr1: 25709114-25711907 Arabidopsis thaliana
AT1G68520 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25710908-25711907 Arabidopsis thaliana
AT1G68520 1.0kb downstream 1.0kb downstream 2794 true Chr1: 25708114-25710907 Arabidopsis thaliana
AT1G68520 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25708114-25709113 Arabidopsis thaliana
AT1G68520 2.0kb upstream 2.0kb upstream 3794 true Chr1: 25709114-25712907 Arabidopsis thaliana
AT1G68520 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25710908-25712907 Arabidopsis thaliana
AT1G68520 2.0kb downstream 2.0kb downstream 3794 true Chr1: 25707114-25710907 Arabidopsis thaliana
AT1G68520 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25707114-25709113 Arabidopsis thaliana
AT1G68520 5.0kb upstream 5.0kb upstream 6794 true Chr1: 25709114-25715907 Arabidopsis thaliana
AT1G68520 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25710908-25715907 Arabidopsis thaliana
AT1G68520 5.0kb downstream 5.0kb downstream 6794 true Chr1: 25704114-25710907 Arabidopsis thaliana
AT1G68520 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25704114-25709113 Arabidopsis thaliana
AT1G68520 10.0kb upstream 10.0kb upstream 11794 true Chr1: 25709114-25720907 Arabidopsis thaliana
AT1G68520 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25710908-25720907 Arabidopsis thaliana
AT1G68520 10.0kb downstream 10.0kb downstream 11794 true Chr1: 25699114-25710907 Arabidopsis thaliana
AT1G68520 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25699114-25709113 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368177 5261 Brassicaceae View MSA
123839349 5264 Brassicales-Malvales View MSA
124350097 5266 SBM View MSA
124251875 5268 Malvidae View MSA
124061495 5270 Rosid View MSA
123743712 5271 Pentapetalae View MSA
122787534 5272 Eudicot View MSA
122046214 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351074 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 341.37     High  
cufflinks 0.22     Low  
cufflinks 320.705     High  
cufflinks 0.241     Low  
cufflinks 289.341     High  
cufflinks 0.165     Low  

0 Strain