Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G67220 0.5kb upstream | 0.5kb | upstream | 5472 | true | Chr1: 25145087-25150558 | Arabidopsis thaliana |
AT1G67220 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 25145087-25145586 | Arabidopsis thaliana |
AT1G67220 0.5kb downstream | 0.5kb | downstream | 5472 | true | Chr1: 25145587-25151058 | Arabidopsis thaliana |
AT1G67220 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 25150559-25151058 | Arabidopsis thaliana |
AT1G67220 1.0kb upstream | 1.0kb | upstream | 5972 | true | Chr1: 25144587-25150558 | Arabidopsis thaliana |
AT1G67220 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 25144587-25145586 | Arabidopsis thaliana |
AT1G67220 1.0kb downstream | 1.0kb | downstream | 5972 | true | Chr1: 25145587-25151558 | Arabidopsis thaliana |
AT1G67220 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 25150559-25151558 | Arabidopsis thaliana |
AT1G67220 2.0kb upstream | 2.0kb | upstream | 6972 | true | Chr1: 25143587-25150558 | Arabidopsis thaliana |
AT1G67220 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 25143587-25145586 | Arabidopsis thaliana |
AT1G67220 2.0kb downstream | 2.0kb | downstream | 6972 | true | Chr1: 25145587-25152558 | Arabidopsis thaliana |
AT1G67220 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 25150559-25152558 | Arabidopsis thaliana |
AT1G67220 5.0kb upstream | 5.0kb | upstream | 9972 | true | Chr1: 25140587-25150558 | Arabidopsis thaliana |
AT1G67220 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 25140587-25145586 | Arabidopsis thaliana |
AT1G67220 5.0kb downstream | 5.0kb | downstream | 9972 | true | Chr1: 25145587-25155558 | Arabidopsis thaliana |
AT1G67220 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 25150559-25155558 | Arabidopsis thaliana |
AT1G67220 10.0kb upstream | 10.0kb | upstream | 14972 | true | Chr1: 25135587-25150558 | Arabidopsis thaliana |
AT1G67220 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 25135587-25145586 | Arabidopsis thaliana |
AT1G67220 10.0kb downstream | 10.0kb | downstream | 14972 | true | Chr1: 25145587-25160558 | Arabidopsis thaliana |
AT1G67220 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 25150559-25160558 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
121493477 | 5273 | Angiosperm | Singleton cluster - no MSA |
122328850 | 5261 | Brassicaceae | Singleton cluster - no MSA |
123770181 | 5264 | Brassicales-Malvales | Singleton cluster - no MSA |
124268725 | 5266 | SBM | Singleton cluster - no MSA |
124124908 | 5268 | Malvidae | Singleton cluster - no MSA |
123853906 | 5270 | Rosid | Singleton cluster - no MSA |
123439944 | 5271 | Pentapetalae | Singleton cluster - no MSA |
122475534 | 5272 | Eudicot | Singleton cluster - no MSA |
120766851 | 5274 | Embryophyte | Singleton cluster - no MSA |
123426645 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.003 | Low | Low | ||
cufflinks | 0.009 | Low | |||
cufflinks | 0.016 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.01 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |