Gene : AT1G66760 A. thaliana TAIR10
Defline:  (1 of 14) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  5612
Name:  ? AT1G66760 Secondary Identifier:  ? PAC:19655013
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66760 0.5kb upstream 0.5kb upstream 2966 true Chr1: 24901478-24904443 Arabidopsis thaliana
AT1G66760 0.5kb upstream 0.5kb upstream 500 false Chr1: 24901478-24901977 Arabidopsis thaliana
AT1G66760 0.5kb downstream 0.5kb downstream 2966 true Chr1: 24901978-24904943 Arabidopsis thaliana
AT1G66760 0.5kb downstream 0.5kb downstream 500 false Chr1: 24904444-24904943 Arabidopsis thaliana
AT1G66760 1.0kb upstream 1.0kb upstream 3466 true Chr1: 24900978-24904443 Arabidopsis thaliana
AT1G66760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24900978-24901977 Arabidopsis thaliana
AT1G66760 1.0kb downstream 1.0kb downstream 3466 true Chr1: 24901978-24905443 Arabidopsis thaliana
AT1G66760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24904444-24905443 Arabidopsis thaliana
AT1G66760 2.0kb upstream 2.0kb upstream 4466 true Chr1: 24899978-24904443 Arabidopsis thaliana
AT1G66760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24899978-24901977 Arabidopsis thaliana
AT1G66760 2.0kb downstream 2.0kb downstream 4466 true Chr1: 24901978-24906443 Arabidopsis thaliana
AT1G66760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24904444-24906443 Arabidopsis thaliana
AT1G66760 5.0kb upstream 5.0kb upstream 7466 true Chr1: 24896978-24904443 Arabidopsis thaliana
AT1G66760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24896978-24901977 Arabidopsis thaliana
AT1G66760 5.0kb downstream 5.0kb downstream 7466 true Chr1: 24901978-24909443 Arabidopsis thaliana
AT1G66760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24904444-24909443 Arabidopsis thaliana
AT1G66760 10.0kb upstream 10.0kb upstream 12466 true Chr1: 24891978-24904443 Arabidopsis thaliana
AT1G66760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24891978-24901977 Arabidopsis thaliana
AT1G66760 10.0kb downstream 10.0kb downstream 12466 true Chr1: 24901978-24914443 Arabidopsis thaliana
AT1G66760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24904444-24914443 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369108 5261 Brassicaceae View MSA
123799719 5264 Brassicales-Malvales View MSA
124297211 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.119       Low
cufflinks 60.568     High  
cufflinks 36.465     High  
cufflinks 42.753     High  
cufflinks 45.291     High  
cufflinks 22.131        

0 Strain