Gene : AT1G66530 A. thaliana TAIR10
Defline:  (1 of 2) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  5589
Name:  ? AT1G66530 Secondary Identifier:  ? PAC:19656771
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66530 0.5kb upstream 0.5kb upstream 3932 true Chr1: 24818911-24822842 Arabidopsis thaliana
AT1G66530 0.5kb upstream 0.5kb upstream 500 false Chr1: 24822343-24822842 Arabidopsis thaliana
AT1G66530 0.5kb downstream 0.5kb downstream 3932 true Chr1: 24818411-24822342 Arabidopsis thaliana
AT1G66530 0.5kb downstream 0.5kb downstream 500 false Chr1: 24818411-24818910 Arabidopsis thaliana
AT1G66530 1.0kb upstream 1.0kb upstream 4432 true Chr1: 24818911-24823342 Arabidopsis thaliana
AT1G66530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24822343-24823342 Arabidopsis thaliana
AT1G66530 1.0kb downstream 1.0kb downstream 4432 true Chr1: 24817911-24822342 Arabidopsis thaliana
AT1G66530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24817911-24818910 Arabidopsis thaliana
AT1G66530 2.0kb upstream 2.0kb upstream 5432 true Chr1: 24818911-24824342 Arabidopsis thaliana
AT1G66530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24822343-24824342 Arabidopsis thaliana
AT1G66530 2.0kb downstream 2.0kb downstream 5432 true Chr1: 24816911-24822342 Arabidopsis thaliana
AT1G66530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24816911-24818910 Arabidopsis thaliana
AT1G66530 5.0kb upstream 5.0kb upstream 8432 true Chr1: 24818911-24827342 Arabidopsis thaliana
AT1G66530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24822343-24827342 Arabidopsis thaliana
AT1G66530 5.0kb downstream 5.0kb downstream 8432 true Chr1: 24813911-24822342 Arabidopsis thaliana
AT1G66530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24813911-24818910 Arabidopsis thaliana
AT1G66530 10.0kb upstream 10.0kb upstream 13432 true Chr1: 24818911-24832342 Arabidopsis thaliana
AT1G66530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24822343-24832342 Arabidopsis thaliana
AT1G66530 10.0kb downstream 10.0kb downstream 13432 true Chr1: 24808911-24822342 Arabidopsis thaliana
AT1G66530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24808911-24818910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499675 5273 Angiosperm View MSA
122338490 5261 Brassicaceae View MSA
123779061 5264 Brassicales-Malvales View MSA
124277395 5266 SBM View MSA
124132601 5268 Malvidae View MSA
123860882 5270 Rosid View MSA
123446464 5271 Pentapetalae View MSA
122482015 5272 Eudicot View MSA
120773013 5274 Embryophyte View MSA
122815339 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.512        
cufflinks 10.713        
cufflinks 7.132        
cufflinks 10.768        
cufflinks 6.813       Low
cufflinks 11.744       High

0 Strain