Gene : HEXO3 A. thaliana TAIR10
Primary Identifier:  ? AT1G65590 Defline:  (1 of 1) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED
Genomic Order:  5490 Name:  ? AT1G65590
Secondary Identifier:  ? PAC:19651263
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6902 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65590 0.5kb upstream 0.5kb upstream 5808 true Chr1: 24385400-24391207 Arabidopsis thaliana
AT1G65590 0.5kb upstream 0.5kb upstream 500 false Chr1: 24385400-24385899 Arabidopsis thaliana
AT1G65590 0.5kb downstream 0.5kb downstream 5808 true Chr1: 24385900-24391707 Arabidopsis thaliana
AT1G65590 0.5kb downstream 0.5kb downstream 500 false Chr1: 24391208-24391707 Arabidopsis thaliana
AT1G65590 1.0kb upstream 1.0kb upstream 6308 true Chr1: 24384900-24391207 Arabidopsis thaliana
AT1G65590 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24384900-24385899 Arabidopsis thaliana
AT1G65590 1.0kb downstream 1.0kb downstream 6308 true Chr1: 24385900-24392207 Arabidopsis thaliana
AT1G65590 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24391208-24392207 Arabidopsis thaliana
AT1G65590 2.0kb upstream 2.0kb upstream 7308 true Chr1: 24383900-24391207 Arabidopsis thaliana
AT1G65590 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24383900-24385899 Arabidopsis thaliana
AT1G65590 2.0kb downstream 2.0kb downstream 7308 true Chr1: 24385900-24393207 Arabidopsis thaliana
AT1G65590 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24391208-24393207 Arabidopsis thaliana
AT1G65590 5.0kb upstream 5.0kb upstream 10308 true Chr1: 24380900-24391207 Arabidopsis thaliana
AT1G65590 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24380900-24385899 Arabidopsis thaliana
AT1G65590 5.0kb downstream 5.0kb downstream 10308 true Chr1: 24385900-24396207 Arabidopsis thaliana
AT1G65590 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24391208-24396207 Arabidopsis thaliana
AT1G65590 10.0kb upstream 10.0kb upstream 15308 true Chr1: 24375900-24391207 Arabidopsis thaliana
AT1G65590 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24375900-24385899 Arabidopsis thaliana
AT1G65590 10.0kb downstream 10.0kb downstream 15308 true Chr1: 24385900-24401207 Arabidopsis thaliana
AT1G65590 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24391208-24401207 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372069 5261 Brassicaceae View MSA
123829142 5264 Brassicales-Malvales View MSA
124337219 5266 SBM View MSA
124240714 5268 Malvidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.241       Low
cufflinks 6.32        
cufflinks 4.629        
cufflinks 5.919        
cufflinks 4.817        
cufflinks 6.901       High

0 Strain