Gene : SMP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G65660 Defline:  (1 of 3) K12819 - pre-mRNA-processing factor SLU7 (SLU7)
Genomic Order:  5496 Name:  ? AT1G65660
Secondary Identifier:  ? PAC:19653385
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65660 0.5kb upstream 0.5kb upstream 3686 true Chr1: 24418107-24421792 Arabidopsis thaliana
AT1G65660 0.5kb upstream 0.5kb upstream 500 false Chr1: 24421293-24421792 Arabidopsis thaliana
AT1G65660 0.5kb downstream 0.5kb downstream 3686 true Chr1: 24417607-24421292 Arabidopsis thaliana
AT1G65660 0.5kb downstream 0.5kb downstream 500 false Chr1: 24417607-24418106 Arabidopsis thaliana
AT1G65660 1.0kb upstream 1.0kb upstream 4186 true Chr1: 24418107-24422292 Arabidopsis thaliana
AT1G65660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24421293-24422292 Arabidopsis thaliana
AT1G65660 1.0kb downstream 1.0kb downstream 4186 true Chr1: 24417107-24421292 Arabidopsis thaliana
AT1G65660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24417107-24418106 Arabidopsis thaliana
AT1G65660 2.0kb upstream 2.0kb upstream 5186 true Chr1: 24418107-24423292 Arabidopsis thaliana
AT1G65660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24421293-24423292 Arabidopsis thaliana
AT1G65660 2.0kb downstream 2.0kb downstream 5186 true Chr1: 24416107-24421292 Arabidopsis thaliana
AT1G65660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24416107-24418106 Arabidopsis thaliana
AT1G65660 5.0kb upstream 5.0kb upstream 8186 true Chr1: 24418107-24426292 Arabidopsis thaliana
AT1G65660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24421293-24426292 Arabidopsis thaliana
AT1G65660 5.0kb downstream 5.0kb downstream 8186 true Chr1: 24413107-24421292 Arabidopsis thaliana
AT1G65660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24413107-24418106 Arabidopsis thaliana
AT1G65660 10.0kb upstream 10.0kb upstream 13186 true Chr1: 24418107-24431292 Arabidopsis thaliana
AT1G65660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24421293-24431292 Arabidopsis thaliana
AT1G65660 10.0kb downstream 10.0kb downstream 13186 true Chr1: 24408107-24421292 Arabidopsis thaliana
AT1G65660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24408107-24418106 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363038 5261 Brassicaceae View MSA
123829420 5264 Brassicales-Malvales View MSA
124339981 5266 SBM View MSA
124238125 5268 Malvidae View MSA
124063285 5270 Rosid View MSA
123752211 5271 Pentapetalae View MSA
122792608 5272 Eudicot View MSA
122043272 5273 Angiosperm View MSA
121344564 5274 Embryophyte View MSA
123424269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.807        
cufflinks 17.086        
cufflinks 16.785        
cufflinks 19.701       High
cufflinks 18.938        
cufflinks 12.428       Low

0 Strain