Gene : AT1G53120 A. thaliana TAIR10
Defline:  (1 of 1) KOG4837 - Uncharacterized conserved protein Genomic Order:  4348
Name:  ? AT1G53120 Secondary Identifier:  ? PAC:19651951
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53120 0.5kb upstream 0.5kb upstream 2522 true Chr1: 19792257-19794778 Arabidopsis thaliana
AT1G53120 0.5kb upstream 0.5kb upstream 500 false Chr1: 19792257-19792756 Arabidopsis thaliana
AT1G53120 0.5kb downstream 0.5kb downstream 2522 true Chr1: 19792757-19795278 Arabidopsis thaliana
AT1G53120 0.5kb downstream 0.5kb downstream 500 false Chr1: 19794779-19795278 Arabidopsis thaliana
AT1G53120 1.0kb upstream 1.0kb upstream 3022 true Chr1: 19791757-19794778 Arabidopsis thaliana
AT1G53120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19791757-19792756 Arabidopsis thaliana
AT1G53120 1.0kb downstream 1.0kb downstream 3022 true Chr1: 19792757-19795778 Arabidopsis thaliana
AT1G53120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19794779-19795778 Arabidopsis thaliana
AT1G53120 2.0kb upstream 2.0kb upstream 4022 true Chr1: 19790757-19794778 Arabidopsis thaliana
AT1G53120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19790757-19792756 Arabidopsis thaliana
AT1G53120 2.0kb downstream 2.0kb downstream 4022 true Chr1: 19792757-19796778 Arabidopsis thaliana
AT1G53120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19794779-19796778 Arabidopsis thaliana
AT1G53120 5.0kb upstream 5.0kb upstream 7022 true Chr1: 19787757-19794778 Arabidopsis thaliana
AT1G53120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19787757-19792756 Arabidopsis thaliana
AT1G53120 5.0kb downstream 5.0kb downstream 7022 true Chr1: 19792757-19799778 Arabidopsis thaliana
AT1G53120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19794779-19799778 Arabidopsis thaliana
AT1G53120 10.0kb upstream 10.0kb upstream 12022 true Chr1: 19782757-19794778 Arabidopsis thaliana
AT1G53120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19782757-19792756 Arabidopsis thaliana
AT1G53120 10.0kb downstream 10.0kb downstream 12022 true Chr1: 19792757-19804778 Arabidopsis thaliana
AT1G53120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19794779-19804778 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041163 5273 Angiosperm View MSA
122372571 5261 Brassicaceae View MSA
123831109 5264 Brassicales-Malvales View MSA
124344806 5266 SBM View MSA
124254124 5268 Malvidae View MSA
124066860 5270 Rosid View MSA
123751088 5271 Pentapetalae View MSA
122789719 5272 Eudicot View MSA
121346685 5274 Embryophyte View MSA
123425095 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.997       High
cufflinks 5.682        
cufflinks 10.151        
cufflinks 5.792        
cufflinks 9.427        
cufflinks 5.121       Low

0 Strain