Gene : FTSH1 A. thaliana TAIR10
Primary Identifier:  ? AT1G50250 Defline:  (1 of 2) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED
Genomic Order:  4047 Name:  ? AT1G50250
Secondary Identifier:  ? PAC:19652976
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50250 0.5kb upstream 0.5kb upstream 3355 true Chr1: 18614209-18617563 Arabidopsis thaliana
AT1G50250 0.5kb upstream 0.5kb upstream 500 false Chr1: 18617064-18617563 Arabidopsis thaliana
AT1G50250 0.5kb downstream 0.5kb downstream 3355 true Chr1: 18613709-18617063 Arabidopsis thaliana
AT1G50250 0.5kb downstream 0.5kb downstream 500 false Chr1: 18613709-18614208 Arabidopsis thaliana
AT1G50250 1.0kb upstream 1.0kb upstream 3855 true Chr1: 18614209-18618063 Arabidopsis thaliana
AT1G50250 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18617064-18618063 Arabidopsis thaliana
AT1G50250 1.0kb downstream 1.0kb downstream 3855 true Chr1: 18613209-18617063 Arabidopsis thaliana
AT1G50250 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18613209-18614208 Arabidopsis thaliana
AT1G50250 2.0kb upstream 2.0kb upstream 4855 true Chr1: 18614209-18619063 Arabidopsis thaliana
AT1G50250 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18617064-18619063 Arabidopsis thaliana
AT1G50250 2.0kb downstream 2.0kb downstream 4855 true Chr1: 18612209-18617063 Arabidopsis thaliana
AT1G50250 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18612209-18614208 Arabidopsis thaliana
AT1G50250 5.0kb upstream 5.0kb upstream 7855 true Chr1: 18614209-18622063 Arabidopsis thaliana
AT1G50250 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18617064-18622063 Arabidopsis thaliana
AT1G50250 5.0kb downstream 5.0kb downstream 7855 true Chr1: 18609209-18617063 Arabidopsis thaliana
AT1G50250 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18609209-18614208 Arabidopsis thaliana
AT1G50250 10.0kb upstream 10.0kb upstream 12855 true Chr1: 18614209-18627063 Arabidopsis thaliana
AT1G50250 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18617064-18627063 Arabidopsis thaliana
AT1G50250 10.0kb downstream 10.0kb downstream 12855 true Chr1: 18604209-18617063 Arabidopsis thaliana
AT1G50250 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18604209-18614208 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360689 5261 Brassicaceae View MSA
123838553 5264 Brassicales-Malvales View MSA
124337875 5266 SBM View MSA
124238414 5268 Malvidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.312     High  
cufflinks 3.27        
cufflinks 96.883     High  
cufflinks 2.399        
cufflinks 104.701     High  
cufflinks 2.628        

0 Strain