Gene : AT1G60420 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13871:SF7 - NUCLEOREDOXIN 1-RELATED Genomic Order:  4936
Name:  ? AT1G60420 Secondary Identifier:  ? PAC:19656960
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60420 0.5kb upstream 0.5kb upstream 3021 true Chr1: 22261388-22264408 Arabidopsis thaliana
AT1G60420 0.5kb upstream 0.5kb upstream 500 false Chr1: 22261388-22261887 Arabidopsis thaliana
AT1G60420 0.5kb downstream 0.5kb downstream 3021 true Chr1: 22261888-22264908 Arabidopsis thaliana
AT1G60420 0.5kb downstream 0.5kb downstream 500 false Chr1: 22264409-22264908 Arabidopsis thaliana
AT1G60420 1.0kb upstream 1.0kb upstream 3521 true Chr1: 22260888-22264408 Arabidopsis thaliana
AT1G60420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22260888-22261887 Arabidopsis thaliana
AT1G60420 1.0kb downstream 1.0kb downstream 3521 true Chr1: 22261888-22265408 Arabidopsis thaliana
AT1G60420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22264409-22265408 Arabidopsis thaliana
AT1G60420 2.0kb upstream 2.0kb upstream 4521 true Chr1: 22259888-22264408 Arabidopsis thaliana
AT1G60420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22259888-22261887 Arabidopsis thaliana
AT1G60420 2.0kb downstream 2.0kb downstream 4521 true Chr1: 22261888-22266408 Arabidopsis thaliana
AT1G60420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22264409-22266408 Arabidopsis thaliana
AT1G60420 5.0kb upstream 5.0kb upstream 7521 true Chr1: 22256888-22264408 Arabidopsis thaliana
AT1G60420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22256888-22261887 Arabidopsis thaliana
AT1G60420 5.0kb downstream 5.0kb downstream 7521 true Chr1: 22261888-22269408 Arabidopsis thaliana
AT1G60420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22264409-22269408 Arabidopsis thaliana
AT1G60420 10.0kb upstream 10.0kb upstream 12521 true Chr1: 22251888-22264408 Arabidopsis thaliana
AT1G60420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22251888-22261887 Arabidopsis thaliana
AT1G60420 10.0kb downstream 10.0kb downstream 12521 true Chr1: 22261888-22274408 Arabidopsis thaliana
AT1G60420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22264409-22274408 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370251 5261 Brassicaceae View MSA
123832947 5264 Brassicales-Malvales View MSA
124337255 5266 SBM View MSA
124244541 5268 Malvidae View MSA
124065936 5270 Rosid View MSA
123740982 5271 Pentapetalae View MSA
122787214 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.133        
cufflinks 37.601     High  
cufflinks 16.073       Low
cufflinks 36.662     High  
cufflinks 19.576        
cufflinks 36.028     High  

0 Strain