Gene : AT1G02305 A. thaliana TAIR10
Defline:  (1 of 3) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  137
Name:  ? AT1G02305 Secondary Identifier:  ? PAC:19655879
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02305 0.5kb upstream 0.5kb upstream 2977 true Chr1: 455188-458164 Arabidopsis thaliana
AT1G02305 0.5kb upstream 0.5kb upstream 500 false Chr1: 455188-455687 Arabidopsis thaliana
AT1G02305 0.5kb downstream 0.5kb downstream 2977 true Chr1: 455688-458664 Arabidopsis thaliana
AT1G02305 0.5kb downstream 0.5kb downstream 500 false Chr1: 458165-458664 Arabidopsis thaliana
AT1G02305 1.0kb upstream 1.0kb upstream 3477 true Chr1: 454688-458164 Arabidopsis thaliana
AT1G02305 1.0kb upstream 1.0kb upstream 1000 false Chr1: 454688-455687 Arabidopsis thaliana
AT1G02305 1.0kb downstream 1.0kb downstream 3477 true Chr1: 455688-459164 Arabidopsis thaliana
AT1G02305 1.0kb downstream 1.0kb downstream 1000 false Chr1: 458165-459164 Arabidopsis thaliana
AT1G02305 2.0kb upstream 2.0kb upstream 4477 true Chr1: 453688-458164 Arabidopsis thaliana
AT1G02305 2.0kb upstream 2.0kb upstream 2000 false Chr1: 453688-455687 Arabidopsis thaliana
AT1G02305 2.0kb downstream 2.0kb downstream 4477 true Chr1: 455688-460164 Arabidopsis thaliana
AT1G02305 2.0kb downstream 2.0kb downstream 2000 false Chr1: 458165-460164 Arabidopsis thaliana
AT1G02305 5.0kb upstream 5.0kb upstream 7477 true Chr1: 450688-458164 Arabidopsis thaliana
AT1G02305 5.0kb upstream 5.0kb upstream 5000 false Chr1: 450688-455687 Arabidopsis thaliana
AT1G02305 5.0kb downstream 5.0kb downstream 7477 true Chr1: 455688-463164 Arabidopsis thaliana
AT1G02305 5.0kb downstream 5.0kb downstream 5000 false Chr1: 458165-463164 Arabidopsis thaliana
AT1G02305 10.0kb upstream 10.0kb upstream 12477 true Chr1: 445688-458164 Arabidopsis thaliana
AT1G02305 10.0kb upstream 10.0kb upstream 10000 false Chr1: 445688-455687 Arabidopsis thaliana
AT1G02305 10.0kb downstream 10.0kb downstream 12477 true Chr1: 455688-468164 Arabidopsis thaliana
AT1G02305 10.0kb downstream 10.0kb downstream 10000 false Chr1: 458165-468164 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366253 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.527     High  
cufflinks 51.288     High  
cufflinks 47.153     High  
cufflinks 51.979     High  
cufflinks 54.475     High  
cufflinks 42.647     High Low

0 Strain