Gene : AT1G01980 A. thaliana TAIR10
Defline:  (1 of 2) KOG1231 - Proteins containing the FAD binding domain Genomic Order:  102
Name:  ? AT1G01980 Secondary Identifier:  ? PAC:19655987
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01980 0.5kb upstream 0.5kb upstream 2328 true Chr1: 340172-342499 Arabidopsis thaliana
AT1G01980 0.5kb upstream 0.5kb upstream 500 false Chr1: 342000-342499 Arabidopsis thaliana
AT1G01980 0.5kb downstream 0.5kb downstream 2328 true Chr1: 339672-341999 Arabidopsis thaliana
AT1G01980 0.5kb downstream 0.5kb downstream 500 false Chr1: 339672-340171 Arabidopsis thaliana
AT1G01980 1.0kb upstream 1.0kb upstream 2828 true Chr1: 340172-342999 Arabidopsis thaliana
AT1G01980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 342000-342999 Arabidopsis thaliana
AT1G01980 1.0kb downstream 1.0kb downstream 2828 true Chr1: 339172-341999 Arabidopsis thaliana
AT1G01980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 339172-340171 Arabidopsis thaliana
AT1G01980 2.0kb upstream 2.0kb upstream 3828 true Chr1: 340172-343999 Arabidopsis thaliana
AT1G01980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 342000-343999 Arabidopsis thaliana
AT1G01980 2.0kb downstream 2.0kb downstream 3828 true Chr1: 338172-341999 Arabidopsis thaliana
AT1G01980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 338172-340171 Arabidopsis thaliana
AT1G01980 5.0kb upstream 5.0kb upstream 6828 true Chr1: 340172-346999 Arabidopsis thaliana
AT1G01980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 342000-346999 Arabidopsis thaliana
AT1G01980 5.0kb downstream 5.0kb downstream 6828 true Chr1: 335172-341999 Arabidopsis thaliana
AT1G01980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 335172-340171 Arabidopsis thaliana
AT1G01980 10.0kb upstream 10.0kb upstream 11828 true Chr1: 340172-351999 Arabidopsis thaliana
AT1G01980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 342000-351999 Arabidopsis thaliana
AT1G01980 10.0kb downstream 10.0kb downstream 11828 true Chr1: 330172-341999 Arabidopsis thaliana
AT1G01980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 330172-340171 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364821 5261 Brassicaceae View MSA
123798841 5264 Brassicales-Malvales View MSA
124296424 5266 SBM View MSA
124148580 5268 Malvidae View MSA
124069535 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain