Gene : AT1G24735 A. thaliana TAIR10
Defline:  (1 of 4) K00588 - caffeoyl-CoA O-methyltransferase (E2.1.1.104) Genomic Order:  2505
Name:  ? AT1G24735 Secondary Identifier:  ? PAC:19654576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24735 0.5kb upstream 0.5kb upstream 2282 true Chr1: 8757364-8759645 Arabidopsis thaliana
AT1G24735 0.5kb upstream 0.5kb upstream 500 false Chr1: 8757364-8757863 Arabidopsis thaliana
AT1G24735 0.5kb downstream 0.5kb downstream 2282 true Chr1: 8757864-8760145 Arabidopsis thaliana
AT1G24735 0.5kb downstream 0.5kb downstream 500 false Chr1: 8759646-8760145 Arabidopsis thaliana
AT1G24735 1.0kb upstream 1.0kb upstream 2782 true Chr1: 8756864-8759645 Arabidopsis thaliana
AT1G24735 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8756864-8757863 Arabidopsis thaliana
AT1G24735 1.0kb downstream 1.0kb downstream 2782 true Chr1: 8757864-8760645 Arabidopsis thaliana
AT1G24735 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8759646-8760645 Arabidopsis thaliana
AT1G24735 2.0kb upstream 2.0kb upstream 3782 true Chr1: 8755864-8759645 Arabidopsis thaliana
AT1G24735 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8755864-8757863 Arabidopsis thaliana
AT1G24735 2.0kb downstream 2.0kb downstream 3782 true Chr1: 8757864-8761645 Arabidopsis thaliana
AT1G24735 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8759646-8761645 Arabidopsis thaliana
AT1G24735 5.0kb upstream 5.0kb upstream 6782 true Chr1: 8752864-8759645 Arabidopsis thaliana
AT1G24735 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8752864-8757863 Arabidopsis thaliana
AT1G24735 5.0kb downstream 5.0kb downstream 6782 true Chr1: 8757864-8764645 Arabidopsis thaliana
AT1G24735 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8759646-8764645 Arabidopsis thaliana
AT1G24735 10.0kb upstream 10.0kb upstream 11782 true Chr1: 8747864-8759645 Arabidopsis thaliana
AT1G24735 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8747864-8757863 Arabidopsis thaliana
AT1G24735 10.0kb downstream 10.0kb downstream 11782 true Chr1: 8757864-8769645 Arabidopsis thaliana
AT1G24735 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8759646-8769645 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
122328775 5261 Brassicaceae Singleton cluster - no MSA
123838295 5264 Brassicales-Malvales View MSA
124322431 5266 SBM View MSA
124247989 5268 Malvidae View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.392        
cufflinks 3.912        
cufflinks 0.307        
cufflinks 4.151       High
cufflinks 0.235     Low Low
cufflinks 2.575        

0 Strain