Gene : AT1G10610 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31945//PTHR31945:SF14 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH90 Genomic Order:  1028
Name:  ? AT1G10610 Secondary Identifier:  ? PAC:19653323
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10610 0.5kb upstream 0.5kb upstream 3321 true Chr1: 3505686-3509006 Arabidopsis thaliana
AT1G10610 0.5kb upstream 0.5kb upstream 500 false Chr1: 3505686-3506185 Arabidopsis thaliana
AT1G10610 0.5kb downstream 0.5kb downstream 3321 true Chr1: 3506186-3509506 Arabidopsis thaliana
AT1G10610 0.5kb downstream 0.5kb downstream 500 false Chr1: 3509007-3509506 Arabidopsis thaliana
AT1G10610 1.0kb upstream 1.0kb upstream 3821 true Chr1: 3505186-3509006 Arabidopsis thaliana
AT1G10610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3505186-3506185 Arabidopsis thaliana
AT1G10610 1.0kb downstream 1.0kb downstream 3821 true Chr1: 3506186-3510006 Arabidopsis thaliana
AT1G10610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3509007-3510006 Arabidopsis thaliana
AT1G10610 2.0kb upstream 2.0kb upstream 4821 true Chr1: 3504186-3509006 Arabidopsis thaliana
AT1G10610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3504186-3506185 Arabidopsis thaliana
AT1G10610 2.0kb downstream 2.0kb downstream 4821 true Chr1: 3506186-3511006 Arabidopsis thaliana
AT1G10610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3509007-3511006 Arabidopsis thaliana
AT1G10610 5.0kb upstream 5.0kb upstream 7821 true Chr1: 3501186-3509006 Arabidopsis thaliana
AT1G10610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3501186-3506185 Arabidopsis thaliana
AT1G10610 5.0kb downstream 5.0kb downstream 7821 true Chr1: 3506186-3514006 Arabidopsis thaliana
AT1G10610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3509007-3514006 Arabidopsis thaliana
AT1G10610 10.0kb upstream 10.0kb upstream 12821 true Chr1: 3496186-3509006 Arabidopsis thaliana
AT1G10610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3496186-3506185 Arabidopsis thaliana
AT1G10610 10.0kb downstream 10.0kb downstream 12821 true Chr1: 3506186-3519006 Arabidopsis thaliana
AT1G10610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3509007-3519006 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041355 5273 Angiosperm View MSA
122367481 5261 Brassicaceae View MSA
123836476 5264 Brassicales-Malvales View MSA
124343779 5266 SBM View MSA
124244260 5268 Malvidae View MSA
124063868 5270 Rosid View MSA
123741521 5271 Pentapetalae View MSA
122795630 5272 Eudicot View MSA
121343945 5274 Embryophyte View MSA
123379944 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.934        
cufflinks 8.314       High
cufflinks 6.136        
cufflinks 6.509        
cufflinks 5.596        
cufflinks 4.98        

0 Strain