Gene : AT1G09780 A. thaliana TAIR10
Defline:  (1 of 2) 5.4.2.11//5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) / Phosphoglyceromutase // Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase Genomic Order:  935
Name:  ? AT1G09780 Secondary Identifier:  ? PAC:19655966
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G09780 0.5kb upstream 0.5kb upstream 3000 true Chr1: 3165370-3168369 Arabidopsis thaliana
AT1G09780 0.5kb upstream 0.5kb upstream 500 false Chr1: 3167870-3168369 Arabidopsis thaliana
AT1G09780 0.5kb downstream 0.5kb downstream 3000 true Chr1: 3164870-3167869 Arabidopsis thaliana
AT1G09780 0.5kb downstream 0.5kb downstream 500 false Chr1: 3164870-3165369 Arabidopsis thaliana
AT1G09780 1.0kb upstream 1.0kb upstream 3500 true Chr1: 3165370-3168869 Arabidopsis thaliana
AT1G09780 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3167870-3168869 Arabidopsis thaliana
AT1G09780 1.0kb downstream 1.0kb downstream 3500 true Chr1: 3164370-3167869 Arabidopsis thaliana
AT1G09780 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3164370-3165369 Arabidopsis thaliana
AT1G09780 2.0kb upstream 2.0kb upstream 4500 true Chr1: 3165370-3169869 Arabidopsis thaliana
AT1G09780 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3167870-3169869 Arabidopsis thaliana
AT1G09780 2.0kb downstream 2.0kb downstream 4500 true Chr1: 3163370-3167869 Arabidopsis thaliana
AT1G09780 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3163370-3165369 Arabidopsis thaliana
AT1G09780 5.0kb upstream 5.0kb upstream 7500 true Chr1: 3165370-3172869 Arabidopsis thaliana
AT1G09780 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3167870-3172869 Arabidopsis thaliana
AT1G09780 5.0kb downstream 5.0kb downstream 7500 true Chr1: 3160370-3167869 Arabidopsis thaliana
AT1G09780 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3160370-3165369 Arabidopsis thaliana
AT1G09780 10.0kb upstream 10.0kb upstream 12500 true Chr1: 3165370-3177869 Arabidopsis thaliana
AT1G09780 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3167870-3177869 Arabidopsis thaliana
AT1G09780 10.0kb downstream 10.0kb downstream 12500 true Chr1: 3155370-3167869 Arabidopsis thaliana
AT1G09780 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3155370-3165369 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372851 5261 Brassicaceae View MSA
123836742 5264 Brassicales-Malvales View MSA
124338470 5266 SBM View MSA
124253094 5268 Malvidae View MSA
124066615 5270 Rosid View MSA
123743757 5271 Pentapetalae View MSA
122792316 5272 Eudicot View MSA
122046842 5273 Angiosperm View MSA
121351073 5274 Embryophyte View MSA
123427099 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.149     High  
cufflinks 85.498     High  
cufflinks 38.642     High  
cufflinks 94.727     High  
cufflinks 31.821     High Low
cufflinks 138.739     High High

0 Strain