Gene : AT1G75000 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11157:SF11 - F25A4.4 Genomic Order:  6468
Name:  ? AT1G75000 Secondary Identifier:  ? PAC:19649936
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5080 Arabidopsis thaliana pathologic  
Athaliana PWY-6433 Arabidopsis thaliana pathologic  
Athaliana PWY-6598 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-7601 Arabidopsis thaliana pathologic  
Athaliana PWY-7619 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75000 0.5kb upstream 0.5kb upstream 1437 true Chr1: 28163150-28164586 Arabidopsis thaliana
AT1G75000 0.5kb upstream 0.5kb upstream 500 false Chr1: 28163150-28163649 Arabidopsis thaliana
AT1G75000 0.5kb downstream 0.5kb downstream 1437 true Chr1: 28163650-28165086 Arabidopsis thaliana
AT1G75000 0.5kb downstream 0.5kb downstream 500 false Chr1: 28164587-28165086 Arabidopsis thaliana
AT1G75000 1.0kb upstream 1.0kb upstream 1937 true Chr1: 28162650-28164586 Arabidopsis thaliana
AT1G75000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28162650-28163649 Arabidopsis thaliana
AT1G75000 1.0kb downstream 1.0kb downstream 1937 true Chr1: 28163650-28165586 Arabidopsis thaliana
AT1G75000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28164587-28165586 Arabidopsis thaliana
AT1G75000 2.0kb upstream 2.0kb upstream 2937 true Chr1: 28161650-28164586 Arabidopsis thaliana
AT1G75000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28161650-28163649 Arabidopsis thaliana
AT1G75000 2.0kb downstream 2.0kb downstream 2937 true Chr1: 28163650-28166586 Arabidopsis thaliana
AT1G75000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28164587-28166586 Arabidopsis thaliana
AT1G75000 5.0kb upstream 5.0kb upstream 5937 true Chr1: 28158650-28164586 Arabidopsis thaliana
AT1G75000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28158650-28163649 Arabidopsis thaliana
AT1G75000 5.0kb downstream 5.0kb downstream 5937 true Chr1: 28163650-28169586 Arabidopsis thaliana
AT1G75000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28164587-28169586 Arabidopsis thaliana
AT1G75000 10.0kb upstream 10.0kb upstream 10937 true Chr1: 28153650-28164586 Arabidopsis thaliana
AT1G75000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28153650-28163649 Arabidopsis thaliana
AT1G75000 10.0kb downstream 10.0kb downstream 10937 true Chr1: 28163650-28174586 Arabidopsis thaliana
AT1G75000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28164587-28174586 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373688 5261 Brassicaceae View MSA
123838728 5264 Brassicales-Malvales View MSA
124337962 5266 SBM View MSA
124244246 5268 Malvidae View MSA
124071953 5270 Rosid View MSA
123751185 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.882        
cufflinks 8.004       High
cufflinks 4.572       Low
cufflinks 6.432        
cufflinks 4.918        
cufflinks 8.176       High

0 Strain